RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ARL13BQ3SXY8 428 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 KIAA1755Q5JYT7 1200 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 COX20Q5RI15 118 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ZNF362Q5T0B9 420 aaPredicted RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 TPGS2Q68CL5 300 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 IQSEC1Q6DN90 963 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 DESI1Q6ICB0 168 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ELMSAN1Q6PJG2 1045 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PPP1R21Q6ZMI0 780 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 RGS9BPQ6ZS82 235 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 USP49Q70CQ1 688 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 KCTD1Q719H9 257 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TUBA1AQ71U36 451 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SAMD7Q7Z3H4 446 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 CREG2Q8IUH2 290 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SIAH1Q8IUQ4 282 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TMCO5AQ8N6Q1 288 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 FSIP1Q8NA03 581 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMG6-208ENST00000570874 ZBTB44Q8NCP5 570 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 LINC00301Q8NCQ3 95 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 BBOF1Q8ND07 529 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 FAM156AQ8NDB6 213 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 OR6C4Q8NGE1 309 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 OR52K1Q8NGK4 314 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 MDM1Q8TC05 714 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 FAM216AQ8WUB2 273 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ZFAND2BQ8WV99 257 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 HSPH1Q92598 858 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 CASP10Q92851 521 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TNFRSF25Q93038 417 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TATDN2Q93075 761 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 CCDC74AQ96AQ1 378 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PLEKHG4BQ96PX9 1271 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TCF25Q9BQ70 676 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 UQCC2Q9BRT2 126 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 NTPCRQ9BSD7 190 aaKnown RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 HGH1Q9BTY7 390 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PHF20Q9BVI0 1012 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 YIPF2Q9BWQ6 316 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PLVAPQ9BX97 442 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TMEM120AQ9BXJ8 343 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 IDI2Q9BXS1 227 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 RNF26Q9BY78 433 aaPredicted RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 SCAND2PQ9GZW5 306 aaPredicted RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 GHITMQ9H3K2 345 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TMEM134Q9H6X4 195 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 CERS4Q9HA82 394 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 VAT1LQ9HCJ6 419 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 CABP5Q9NP86 173 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ITM2CQ9NQX7 267 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 HAUS2Q9NVX0 235 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ADPRHL2Q9NX46 363 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 GGA3Q9NZ52 723 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 RTEL1Q9NZ71 1219 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TBC1D29Q9UFV1 150 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ADGRE2Q9UHX3 823 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TEKT2Q9UIF3 430 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SERPINB13Q9UIV8 391 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PTBP2Q9UKA9 531 aaKnown RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 FZD1Q9UP38 647 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ZKSCAN5Q9Y2L8 839 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 COL2A1P02458 1487 aaPredicted RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 ATRNL1Q5VV63 1379 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 TRIP12Q14669 1992 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 ANK1P16157 1881 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SSC5DA1L4H1 1573 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 A0A1W2PRG0 241 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 KLRF2D3W0D1 207 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 L7N2F9 121 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 FZD9O00144 591 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 EBAG9O00559 213 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 NEMP1O14524 444 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 ENC1O14682 589 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 AXIN1O15169 862 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 FOXN1O15353 648 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 AP5Z1O43299 807 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SPOPO43791 374 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 DOK2O60496 412 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 PPP1R11O60927 126 aaPredicted RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 AOC2O75106 756 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SEC22BO75396 215 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 TRIM16O95361 564 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SLU7O95391 586 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 ADCY5O95622 1261 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CAVIN2O95810 425 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 HLA-DOAP06340 250 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 VIMP08670 466 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 CLTBP09497 229 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CALM1P0DP23 149 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CALM2P0DP24 149 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CALM3P0DP25 149 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 DLATP10515 647 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 COL6A2P12110 1019 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 SNRPBP14678 240 aaKnown RBP3.78□□□□□ -1.8
SMG6-208ENST00000570874 CYP11B2P19099 503 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 IL11P20809 199 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 YY1P25490 414 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 CNTFP26441 200 aa3.78□□□□□ -1.8
SMG6-208ENST00000570874 GSTT1P30711 240 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms