RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 HPS3Q969F9 1004 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CLDN23Q96B33 292 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MKNK1Q9BUB5 465 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TRMT61BQ9BVS5 477 aaKnown RBP18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MTMR12Q9C0I1 747 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 LTB4R2Q9NPC1 389 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 AGPAT3Q9NRZ7 376 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 OBP2AQ9NY56 170 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 L1RE1Q9UN81 338 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SLC27A5Q9Y2P5 690 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SHISA7A6NL88 538 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SOBPA7XYQ1 873 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GABRDO14764 452 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HUS1O60921 280 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MYL1P05976 194 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TMEM191BP0C7N4 346 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SLFN14P0C7P3 912 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HAPLN1P10915 354 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GLULP15104 373 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 RPS9P46781 194 aaKnown RBP18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FCHO2Q0JRZ9 810 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FOXD4L5Q5VV16 416 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CBWD2Q8IUF1 395 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CSGALNACT2Q8N6G5 542 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FOXD4L4Q8WXT5 416 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ANKRD36BP1Q96IX9 119 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PKMYT1Q99640 499 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FOXQ1Q9C009 403 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZNF334Q9HCZ1 680 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 USP25Q9UHP3 1055 aa18.38■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZFHX2Q9C0A1 2572 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZNF638Q14966 1978 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 A0A1W2PRU2 124 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ARNTLO00327 626 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ACTN4O43707 911 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CDC25CP30307 473 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 LHX1P48742 406 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TSPY1Q01534 308 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 VEPH1Q14D04 833 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SNRNP35Q16560 246 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 DUOXA2Q1HG44 320 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 C1orf210Q8IVY1 113 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZNF687Q8N1G0 1237 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MSANTD3Q96H12 275 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SEMA4AQ9H3S1 761 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 IL21Q9HBE4 155 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HPSEQ9Y251 543 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PCDHB5Q9Y5E4 795 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FAM186AA6NE01 2351 aa18.37■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FAM237AA0A1B0GTK4 181 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PRR23AA6NEV1 266 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MAN2B1O00754 1011 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 NCANO14594 1321 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GFRA3O60609 400 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PRPF40AO75400 957 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TNNC2P02585 160 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 DCNP07585 359 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FAM163BP0C2L3 166 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CMA1P23946 247 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MYL7Q01449 175 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PTPRJQ12913 1337 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MYO1EQ12965 1108 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CUL4BQ13620 913 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MGAT5BQ3V5L5 792 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CFAP221Q4G0U5 840 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 INTS6LQ5JSJ4 861 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZNF852Q6ZMS4 543 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MAMSTRQ6ZN01 415 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HS2ST1Q7LGA3 356 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FUBP3Q96I24 572 aaKnown RBP eCLIP18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CFAP54Q96N23 3096 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SEPT5Q99719 369 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ANAPC1Q9H1A4 1944 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 BRD9Q9H8M2 597 aa18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MRPS17Q9Y2R5 130 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-208ENST00000570189 RIF1Q5UIP0 2472 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CHADO15335 359 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 NCAM2O15394 837 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 KLRC4O43908 158 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SOAT2O75908 522 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GJA1P17302 382 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GABRR2P28476 465 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PCSK1P29120 753 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 VIPR2P41587 438 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 BFSP1Q12934 665 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PSMD2Q13200 908 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PSMD6Q15008 389 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 KNOP1Q1ED39 458 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SOWAHAQ2M3V2 549 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZNF528Q3MIS6 628 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ARHGAP15Q53QZ3 475 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 C1orf228Q6PIY5 440 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TPRG1Q6ZUI0 275 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CEP57L1Q8IYX8 460 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 XXYLT1Q8NBI6 393 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 OR5B17Q8NGF7 314 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GOLGA5Q8TBA6 731 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 LPIN3Q9BQK8 851 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms