RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 ARPP19P56211 112 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 NUCB2P80303 420 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 DNM1Q05193 864 aaKnown RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ALCAMQ13740 583 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 POSTNQ15063 836 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 PTPAQ15257 358 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 DUSP6Q16828 381 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 RSPO4Q2I0M5 234 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 SEZ6Q53EL9 994 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 NKAPLQ5M9Q1 402 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ATAT1Q5SQI0 421 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 RARS2Q5T160 578 aaKnown RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 NT5DC1Q5TFE4 455 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 FAM171A1Q5VUB5 890 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 EEF1DP3Q658K8 133 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ADALQ6DHV7 355 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ARMCX5Q6P1M9 558 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 FUT10Q6P4F1 479 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ZPBP2Q6X784 338 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 USP37Q86T82 979 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 COLGALT2Q8IYK4 626 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 MRPL43Q8N983 215 aaKnown RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 LINC00301Q8NCQ3 95 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 TMEM161BQ8NDZ6 487 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 STAMQ92783 540 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 HVCN1Q96D96 273 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 RPGRIP1Q96KN7 1286 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 NECAB3Q96P71 396 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ACCSQ96QU6 501 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ACO2Q99798 780 aaKnown RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 HERC2P3Q9BVR0 1158 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 SCAND2PQ9GZW5 306 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ZBP1Q9H171 429 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 TNMDQ9H2S6 317 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 SFXN1Q9H9B4 322 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 MAGEF1Q9HAY2 307 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 EXOC1Q9NV70 894 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 TBX20Q9UMR3 447 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 POLIQ9UNA4 740 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 NR2E1Q9Y466 385 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ZMYM2Q9UBW7 1377 aa5.24□□□□□ -1.57
CNOT1-219ENST00000569882 ARID1BQ8NFD5 2236 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-219ENST00000569882 H7C4K7 107 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 J3QW42 95 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 PODXLO00592 558 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 PRRG1O14668 218 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TNFRSF10BO14763 440 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 OGTO15294 1046 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 MBTPS2O43462 519 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 MMP20O60882 483 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 CLASP2O75122 1294 aaKnown RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 LINC00271P0C7V0 271 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 CXCL8P10145 99 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 MTHFRP42898 656 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ITIH3Q06033 890 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 MAPK7Q13164 816 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ADAM15Q13444 863 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 PKP1Q13835 747 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 CBX2Q14781 532 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TMEM132DQ14C87 1099 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TRIP4Q15650 581 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 PTPN14Q15678 1187 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 PSMD5Q16401 504 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ZC2HC1CQ53FD0 456 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ANKRD54Q6NXT1 300 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 C16orf46Q6P387 395 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 DCLRE1AQ6PJP8 1040 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TMC5Q6UXY8 1006 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 DSTYKQ6XUX3 929 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 CCDC149Q6ZUS6 474 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ANKS3Q6ZW76 656 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 USP49Q70CQ1 688 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 HS2ST1Q7LGA3 356 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TMEM173Q86WV6 379 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 METTL23Q86XA0 190 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 PALB2Q86YC2 1186 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ADHFE1Q8IWW8 467 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 FMR1NBQ8N0W7 255 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 DAW1Q8N136 415 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 GJD3Q8N144 294 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ELMOD1Q8N336 334 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 CEP120Q8N960 986 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TDRD5Q8NAT2 981 aaKnown RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 BEST2Q8NFU1 509 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 ACSF2Q96CM8 615 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 B3GALT6Q96L58 329 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 SNX27Q96L92 541 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 NECTIN4Q96NY8 510 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TTPALQ9BTX7 342 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 SMG9Q9H0W8 520 aaKnown RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 TMEM206Q9H813 350 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 MAN1C1Q9NR34 630 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 BLOC1S4Q9NUP1 217 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 CACNG4Q9UBN1 327 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 PRKAG3Q9UGI9 489 aa5.23□□□□□ -1.57
CNOT1-219ENST00000569882 HOOK1Q9UJC3 728 aaKnown RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 AGO2Q9UKV8 859 aaKnown RBP5.23□□□□□ -1.57
CNOT1-219ENST00000569882 KCNH3Q9ULD8 1083 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms