RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 DCAF12L1Q5VU92 463 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 HACE1Q8IYU2 909 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 TMEM35BQ8NCS4 154 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 GOLGA1Q92805 767 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 TSPAN18Q96SJ8 248 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 RSAD1Q9HA92 442 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 FAM49BQ9NUQ9 324 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 M0QYV0 167 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 DDX3YO15523 660 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 THP07101 528 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 COMTP21964 271 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 RAB27AP51159 221 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 C1QBPQ07021 282 aaKnown RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 DAB2IPQ5VWQ8 1189 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 ECHDC2Q86YB7 292 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 USP38Q8NB14 1042 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 OR6B3Q8NGW1 331 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 UBE2Q2Q8WVN8 375 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 KRT35Q92764 455 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 GDAP2Q9NXN4 497 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 INPP5FQ9Y2H2 1132 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 SQORQ9Y6N5 450 aa11.61□□□□□ -0.55
PDXDC1-216ENST00000569715 NBNO60934 754 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 MYBL1P10243 752 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 LMO2P25791 158 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 MAMLD1Q13495 774 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 SGO2Q562F6 1265 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 ZNF598Q86UK7 904 aaKnown RBP11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 ALG3Q92685 438 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 TRIM11Q96F44 468 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 MED7O43513 233 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 VDRP11473 427 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 CDR1P51861 262 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 SV2CQ496J9 727 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 OSTM1Q86WC4 334 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 CPXM1Q96SM3 734 aa11.6□□□□□ -0.55
PDXDC1-216ENST00000569715 PDGFRBP09619 1106 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 SELPP16109 830 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 PNPLA4P41247 253 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 CKAP4Q07065 602 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 LIN9Q5TKA1 542 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 PLEKHA7Q6IQ23 1121 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 LHX5Q9H2C1 402 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 SLC38A7Q9NVC3 462 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 TSPAN16Q9UKR8 245 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 TCRBV5S1A1TA0A578 114 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 PODXLO00592 558 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 RPL7AP62424 266 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 LIMS2Q7Z4I7 341 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 PDCL2Q8N4E4 241 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 VCPIP1Q96JH7 1222 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 RGS18Q9NS28 235 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 CEP83Q9Y592 693 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 TANC1Q9C0D5 1861 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 A8MXQ7 604 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 C9IYK1 514 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 PFKMP08237 780 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 TCTN1Q2MV58 587 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 GOLGA7BQ2TAP0 167 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 PAN2Q504Q3 1202 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 CCDC181Q5TID7 509 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 ERICH1Q86X53 443 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 ADGRF2Q8IZF7 708 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 APPL2Q8NEU8 664 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 DIS3LQ8TF46 1054 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 CD101Q93033 1021 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 ZNF518BQ9C0D4 1074 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 TSC2P49815 1807 aa11.59□□□□□ -0.55
PDXDC1-216ENST00000569715 TULP2O00295 520 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 B4GALT3O60512 393 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 ERBB2P04626 1255 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 RHOXF2BP0C7M4 288 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 GPD2P43304 727 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 ZNF211Q13398 564 aaPredicted RBP11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 CNGA2Q16280 664 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 AADACL2Q6P093 401 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 ZNF572Q7Z3I7 529 aaPredicted RBP11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 TTC30AQ86WT1 665 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 ANKZF1Q9H8Y5 726 aa11.58□□□□□ -0.55
PDXDC1-216ENST00000569715 F8W810 466 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 PIK3R2O00459 728 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 CEP104O60308 925 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 CCDC130P13994 396 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 RBM10P98175 930 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 WSCD1Q658N2 575 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 TTC39CQ8N584 583 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 SPATA4Q8NEY3 305 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 FAM124BQ9H5Z6 455 aaPredicted RBP11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 I3L4J1 428 aa11.58□□□□□ -0.56
PDXDC1-216ENST00000569715 CYB561D2O14569 222 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms