RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 PCDHA4Q9UN74 947 aa6.84□□□□□ -1.31
LINC00556-201ENST00000569603 GINS2Q9Y248 185 aa6.84□□□□□ -1.31
LINC00556-201ENST00000569603 PCDHB12Q9Y5F1 795 aa6.84□□□□□ -1.31
LINC00556-201ENST00000569603 CACNA1IQ9P0X4 2223 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 C2orf71A6NGG8 1288 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 MEIS3P2A8K0S8 358 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 PER2O15055 1255 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 GAS7O60861 476 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 ZNF623O75123 536 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 MAFO75444 373 aaPredicted RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 CSDE1O75534 798 aaKnown RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 CTDNEP1O95476 244 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 EOMESO95936 686 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 PSMA5P28066 241 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 HOXA11P31270 313 aaPredicted RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 NDUFV1P49821 464 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 CCT2P78371 535 aaKnown RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 NHLH1Q02575 133 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 PPP2R5CQ13362 524 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 ECM1Q16610 540 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 XKR3Q5GH77 459 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 ZNF648Q5T619 568 aaPredicted RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 LRCH2Q5VUJ6 765 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 GALNT17Q6IS24 598 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 ANKRD54Q6NXT1 300 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 RBM23Q86U06 439 aaKnown RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 WDR75Q8IWA0 830 aaKnown RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 PLD6Q8N2A8 252 aaKnown RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 LRRC43Q8N309 656 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 MRPL43Q8N983 215 aaKnown RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 FEZF2Q8TBJ5 459 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 HAS1Q92839 578 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 WDR89Q96FK6 387 aaPredicted RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 MAP7D2Q96T17 732 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 PHF20Q9BVI0 1012 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 PHF7Q9BWX1 381 aaPredicted RBP6.83□□□□□ -1.32
LINC00556-201ENST00000569603 RETREG1Q9H6L5 497 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 TLE6Q9H808 572 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 ABCB6Q9NP58 842 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 CHST12Q9NRB3 414 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 CDH22Q9UJ99 828 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 IRAK3Q9Y616 596 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 PLXNA3P51805 1871 aa6.83□□□□□ -1.32
LINC00556-201ENST00000569603 STK36Q9NRP7 1315 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 FSD2A1L4K1 749 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 INPPL1O15357 1258 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 REC8O95072 547 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 CSPG5O95196 566 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 DEXIO95424 95 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 FGFR4P22455 802 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ATICP31939 592 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 PPM1AP35813 382 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 TRAPPC10P48553 1259 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ZXDAP98168 799 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ZKSCAN8Q15776 578 aaPredicted RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 EARS2Q5JPH6 523 aaKnown RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 UBXN11Q5T124 520 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 SYCP2LQ5T4T6 812 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 PPP4R3AQ6IN85 833 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 EP400NLQ6ZTU2 488 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 FERMT3Q86UX7 667 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ZNF410Q86VK4 478 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 CKAP2LQ8IYA6 745 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 THNSL1Q8IYQ7 743 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 CHPFQ8IZ52 775 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 BLIDQ8IZY5 108 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 CCDC89Q8N998 374 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 VPS37AQ8NEZ2 397 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 PRSS33Q8NF86 280 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 PPP2R3CQ969Q6 453 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 SLC39A13Q96H72 371 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ZNF668Q96K58 619 aaPredicted RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ZNF558Q96NG5 402 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 TCF25Q9BQ70 676 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 SH2D3AQ9BRG2 576 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 IER2Q9BTL4 223 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 TEKT3Q9BXF9 490 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 UPF3BQ9BZI7 483 aaKnown RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ZBP1Q9H171 429 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 CCDC86Q9H6F5 360 aaKnown RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 DHX33Q9H6R0 707 aaKnown RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 MINDY3Q9H8M7 445 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 NGRNQ9NPE2 291 aaKnown RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 NRBP2Q9NSY0 501 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 GJB4Q9NTQ9 266 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 SPG21Q9NZD8 308 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 AKT3Q9Y243 479 aa6.82□□□□□ -1.32
LINC00556-201ENST00000569603 MTCL1Q9Y4B5 1905 aaKnown RBP6.82□□□□□ -1.32
LINC00556-201ENST00000569603 CHD8Q9HCK8 2581 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 A0A087WZ62 844 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 CCDC163A0A0D9SF12 145 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 TMEM221A6NGB7 291 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 M0R296 226 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 TBX3O15119 743 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 CHMP2AO43633 222 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 ICMTO60725 284 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 PFKFB2O60825 505 aa6.81□□□□□ -1.32
LINC00556-201ENST00000569603 CLASP2O75122 1294 aaKnown RBP6.81□□□□□ -1.32
LINC00556-201ENST00000569603 OFD1O75665 1012 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms