RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 SUCLA2Q9P2R7 463 aaPredicted RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 MRPS23Q9Y3D9 190 aaKnown RBP6.55□□□□□ -1.36
CDH13-212ENST00000569144 IPPQ9Y573 584 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 TAF6LQ9Y6J9 622 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 PIAS3Q9Y6X2 628 aa6.55□□□□□ -1.36
CDH13-212ENST00000569144 SF3B1O75533 1304 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDH13-212ENST00000569144 A0A096LPE4 126 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 A0A1W2PPZ6 126 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SMCO2A6NFE2 343 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SH2B2O14492 632 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 GIPC1O14908 333 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 MAFO75444 373 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 TOP3BO95985 862 aaKnown RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 PROCP04070 461 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 RHOP08100 348 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 FCARP24071 287 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SFNP31947 248 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 MPLP40238 635 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 GATA4P43694 442 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 JAK3P52333 1124 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 MLLT6P55198 1093 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 NRG1Q02297 640 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 GRM2Q14416 872 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 PSMD5Q16401 504 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SLC5A9Q2M3M2 681 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SPRED3Q2MJR0 410 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SOWAHCQ53LP3 525 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 XKR3Q5GH77 459 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 AXDND1Q5T1B0 1012 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 IGF2-ASQ6U949 168 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 CACNA2D4Q7Z3S7 1137 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SRGAP1Q7Z6B7 1085 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 KSR1Q8IVT5 923 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 LNX1Q8TBB1 728 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 GAB3Q8WWW8 586 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 CCDC51Q96ER9 411 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 JPH2Q9BR39 696 aaPredicted RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 TTPALQ9BTX7 342 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 EDEM2Q9BV94 578 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 ZFP14Q9HCL3 533 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 VPS45Q9NRW7 570 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 COL4A3BPQ9Y5P4 624 aa6.54□□□□□ -1.36
CDH13-212ENST00000569144 MTCL1Q9Y4B5 1905 aaKnown RBP6.54□□□□□ -1.36
CDH13-212ENST00000569144 COL4A2P08572 1712 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 GREB1Q4ZG55 1949 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 CCDC163A0A0D9SF12 145 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 PRC1O43663 620 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 TADA2AO75478 443 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 RPP40O75818 363 aaKnown RBP6.53□□□□□ -1.36
CDH13-212ENST00000569144 AKAP3O75969 853 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 STBD1O95210 358 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 CEACAM1P13688 526 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 CEBPBP17676 345 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 PSMC3P17980 439 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 CCNE1P24864 410 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 AXLP30530 894 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 GDI1P31150 447 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 CIITAP33076 1130 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 CD68P34810 354 aaPredicted RBP6.53□□□□□ -1.36
CDH13-212ENST00000569144 LIFRP42702 1097 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 GRIA4P48058 902 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 GRIK3Q13003 919 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 HDAC1Q13547 482 aaPredicted RBP6.53□□□□□ -1.36
CDH13-212ENST00000569144 RAB33AQ14088 237 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 HSP90AA2PQ14568 343 aaPredicted RBP6.53□□□□□ -1.36
CDH13-212ENST00000569144 PRR16Q569H4 304 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 DGKKQ5KSL6 1271 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 DAB2IPQ5VWQ8 1189 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 JAKMIP3Q5VZ66 844 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 PDXDC1Q6P996 788 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 KBTBD6Q86V97 674 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 HACE1Q8IYU2 909 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 FANCBQ8NB91 859 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 GSTCDQ8NEC7 633 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 RDM1Q8NG50 284 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 DEPDC1BQ8WUY9 529 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 LENG9Q96B70 501 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 KLHDC7BQ96G42 594 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 TMEM87BQ96K49 555 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 RIT2Q99578 217 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 SH2D3AQ9BRG2 576 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 EIF2AQ9BY44 585 aaKnown RBP6.53□□□□□ -1.36
CDH13-212ENST00000569144 SMOC1Q9H4F8 434 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 MINDY3Q9H8M7 445 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 RBM12Q9NTZ6 932 aaKnown RBP6.53□□□□□ -1.36
CDH13-212ENST00000569144 BARHL2Q9NY43 387 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 ANKFY1Q9P2R3 1169 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 NEUROG3Q9Y4Z2 214 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 SLC12A7Q9Y666 1083 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 ZMYM2Q9UBW7 1377 aa6.53□□□□□ -1.36
CDH13-212ENST00000569144 SETXQ7Z333 2677 aaKnown RBP6.53□□□□□ -1.36
CDH13-212ENST00000569144 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
CDH13-212ENST00000569144 TMEM150BA6NC51 233 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 C4orf47A7E2U8 309 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 ARNTLO00327 626 aa6.52□□□□□ -1.37
CDH13-212ENST00000569144 DDX3YO15523 660 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms