RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 TAP1Q03518 808 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 TRIM71Q2Q1W2 868 aaKnown RBP9.97□□□□□ -0.81
CNOT1-214ENST00000568917 CFAP221Q4G0U5 840 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 FBXO47Q5MNV8 452 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 LIN9Q5TKA1 542 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 MON1BQ7L1V2 547 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 MRPL10Q7Z7H8 261 aaKnown RBP9.97□□□□□ -0.81
CNOT1-214ENST00000568917 DAAM2Q86T65 1068 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 UNC93AQ86WB7 457 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 CREG2Q8IUH2 290 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 TMEM35BQ8NCS4 154 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 ZNF653Q96CK0 615 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 HES6Q96HZ4 224 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 FAM84AQ96KN4 292 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 ZMAT2Q96NC0 199 aaKnown RBP9.97□□□□□ -0.81
CNOT1-214ENST00000568917 SELENOOQ9BVL4 669 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 FAM117AQ9C073 453 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 MIS12Q9H081 205 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 ERVK-5Q9HDB9 667 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 UBN1Q9NPG3 1134 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.97□□□□□ -0.81
CNOT1-214ENST00000568917 FAM105AQ9NUU6 356 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 GDAP2Q9NXN4 497 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 CTTNBP2NLQ9P2B4 639 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
CNOT1-214ENST00000568917 STRIP2Q9ULQ0 834 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 TTC7AQ9ULT0 858 aaPredicted RBP9.97□□□□□ -0.81
CNOT1-214ENST00000568917 NOD1Q9Y239 953 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 STXBP5LQ9Y2K9 1186 aa9.97□□□□□ -0.81
CNOT1-214ENST00000568917 FCF1Q9Y324 198 aaKnown RBP9.97□□□□□ -0.81
CNOT1-214ENST00000568917 SMIM28A0A1B0GU29 152 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 KBTBD13C9JR72 458 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 DNM1LO00429 736 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 BUB1BO60566 1050 aaPredicted RBP9.96□□□□□ -0.82
CNOT1-214ENST00000568917 DXOO77932 396 aaKnown RBP9.96□□□□□ -0.82
CNOT1-214ENST00000568917 CALB1P05937 261 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 WEE2P0C1S8 567 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 MMP8P22894 467 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 MCM3P25205 808 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 THPOP40225 353 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 SLC1A1P43005 524 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 RAD23BP54727 409 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 PAK2Q13177 524 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 SV2CQ496J9 727 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 CCDC181Q5TID7 509 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 C9orf57Q5W0N0 161 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 PLEKHA7Q6IQ23 1121 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 CCDC70Q6NSX1 233 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 RETREG3Q86VR2 466 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 SMG8Q8ND04 991 aaKnown RBP9.96□□□□□ -0.82
CNOT1-214ENST00000568917 ZNF564Q8TBZ8 553 aaPredicted RBP9.96□□□□□ -0.82
CNOT1-214ENST00000568917 CAGE1Q8TC20 777 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 ACTRT1Q8TDG2 376 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 PGBD4Q96DM1 585 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 ARHGEF26Q96DR7 871 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 CYFIP2Q96F07 1278 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 TMEM176AQ96HP8 235 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 NUP85Q9BW27 656 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 WNT8AQ9H1J5 351 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 CARD9Q9H257 536 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 OSGEPQ9NPF4 335 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 ACP6Q9NPH0 428 aa9.96□□□□□ -0.82
CNOT1-214ENST00000568917 CNOT8Q9UFF9 292 aaKnown RBP9.96□□□□□ -0.82
CNOT1-214ENST00000568917 A0A0U1RQF3 1178 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 A0A1W2PQ45 241 aaPredicted RBP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 A0A1W2PQY0 241 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 TARSL2A2RTX5 802 aaKnown RBP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 CCDC66A2RUB6 948 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 ARVCFO00192 962 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 FTCDO95954 541 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 ITGA4P13612 1032 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 CD58P19256 250 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 RPL9P32969 192 aaKnown RBP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 MAN1A1P33908 653 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 SLC19A1P41440 591 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 TAF6P49848 677 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 DSC3Q14574 896 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 CNGA2Q16280 664 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 ERCC6LQ2NKX8 1250 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 GLE1Q53GS7 698 aaKnown RBP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 NAA35Q5VZE5 725 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 LIMS2Q7Z4I7 341 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 RASGEF1CQ8N431 466 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 MMGT1Q8N4V1 131 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 UBL4BQ8N7F7 174 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 SLC4A11Q8NBS3 891 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 SPATA18Q8TC71 538 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 WHAMMQ8TF30 809 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 WNT8BQ93098 351 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 PPP1R10Q96QC0 940 aaKnown RBP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 NAP1L3Q99457 506 aaPredicted RBP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 NT5C1AQ9BXI3 368 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 PAK6Q9NQU5 681 aaPredicted RBP9.95□□□□□ -0.82
CNOT1-214ENST00000568917 STARD7Q9NQZ5 370 aa9.95□□□□□ -0.82
CNOT1-214ENST00000568917 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms