RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ASTLQ6HA08 431 aaPredicted RBP27.04■■□□□ 1.92
FANCA-228ENST00000567943 IQCEQ6IPM2 695 aa27.04■■□□□ 1.92
FANCA-228ENST00000567943 OSTM1Q86WC4 334 aa27.04■■□□□ 1.92
FANCA-228ENST00000567943 SLC9A9Q8IVB4 645 aa27.04■■□□□ 1.92
FANCA-228ENST00000567943 THEM5Q8N1Q8 247 aa27.04■■□□□ 1.92
FANCA-228ENST00000567943 GUF1Q8N442 669 aaKnown RBP27.04■■□□□ 1.92
FANCA-228ENST00000567943 ZNF516Q92618 1163 aa27.04■■□□□ 1.92
FANCA-228ENST00000567943 HSFX1Q9UBD0 423 aa27.04■■□□□ 1.92
FANCA-228ENST00000567943 SNX9Q9Y5X1 595 aa27.04■■□□□ 1.92
FANCA-228ENST00000567943 ZNF197O14709 1029 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 PI15O43692 258 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 CALUO43852 315 aaPredicted RBP27.03■■□□□ 1.92
FANCA-228ENST00000567943 PRPF40AO75400 957 aaKnown RBP27.03■■□□□ 1.92
FANCA-228ENST00000567943 MYL4P12829 197 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 CLCN5P51795 746 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 CYP4A22Q5TCH4 519 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 TANGO2Q6ICL3 276 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 TRAPPC11Q7Z392 1133 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 LIMS2Q7Z4I7 341 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 SHKBP1Q8TBC3 707 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 PLEKHO2Q8TD55 490 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 ERCC4Q92889 916 aaPredicted RBP27.03■■□□□ 1.92
FANCA-228ENST00000567943 MFSD1Q9H3U5 465 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 ZNF334Q9HCZ1 680 aaPredicted RBP27.03■■□□□ 1.92
FANCA-228ENST00000567943 ASAH2Q9NR71 780 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 RMND1Q9NWS8 449 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 CA14Q9ULX7 337 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 TRAF3IP3Q9Y228 551 aa27.03■■□□□ 1.92
FANCA-228ENST00000567943 VPS13AQ96RL7 3174 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 HCRTO43612 131 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 ATF6P18850 670 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 ALDH1A3P47895 512 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 NHLH1Q02575 133 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 PLD1Q13393 1074 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 SOWAHAQ2M3V2 549 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 FAM78AQ5JUQ0 283 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 DNAJB7Q7Z6W7 309 aaPredicted RBP27.02■■□□□ 1.92
FANCA-228ENST00000567943 SMYD4Q8IYR2 804 aaPredicted RBP27.02■■□□□ 1.92
FANCA-228ENST00000567943 FLCNQ8NFG4 579 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 TMEM174Q8WUU8 243 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 PKMYT1Q99640 499 aa27.02■■□□□ 1.92
FANCA-228ENST00000567943 HOOK1Q9UJC3 728 aaKnown RBP27.02■■□□□ 1.92
FANCA-228ENST00000567943 USP34Q70CQ2 3546 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 GABRDO14764 452 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 KINO60870 393 aaKnown RBP27.01■■□□□ 1.91
FANCA-228ENST00000567943 HUS1O60921 280 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 SMC2O95347 1197 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 CST3P01034 146 aaPredicted RBP27.01■■□□□ 1.91
FANCA-228ENST00000567943 CASP4P49662 377 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 EPHB3P54753 998 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 MYO1EQ12965 1108 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 CCDC142Q17RM4 750 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 CEP135Q66GS9 1140 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 TOP6BLQ8N6T0 577 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 LEMD2Q8NC56 503 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 SMARCE1Q969G3 411 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 PSMG2Q969U7 264 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 HPDLQ96IR7 371 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 GSDMAQ96QA5 445 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 LPIN3Q9BQK8 851 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 DDX43Q9NXZ2 648 aaKnown RBP27.01■■□□□ 1.91
FANCA-228ENST00000567943 PCDHA5Q9Y5H7 936 aa27.01■■□□□ 1.91
FANCA-228ENST00000567943 DENND4CQ5VZ89 1909 aa27■■□□□ 1.91
FANCA-228ENST00000567943 ECI2O75521 394 aa27■■□□□ 1.91
FANCA-228ENST00000567943 ACAT1P24752 427 aaKnown RBP27■■□□□ 1.91
FANCA-228ENST00000567943 TEAD2Q15562 447 aa27■■□□□ 1.91
FANCA-228ENST00000567943 GAREM2Q75VX8 874 aa27■■□□□ 1.91
FANCA-228ENST00000567943 TMEM86AQ8N2M4 240 aa27■■□□□ 1.91
FANCA-228ENST00000567943 ASB16Q96NS5 453 aa27■■□□□ 1.91
FANCA-228ENST00000567943 SEPT5Q99719 369 aaPredicted RBP27■■□□□ 1.91
FANCA-228ENST00000567943 ACBD6Q9BR61 282 aa27■■□□□ 1.91
FANCA-228ENST00000567943 NCANO14594 1321 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 HAPLN1P10915 354 aaPredicted RBP26.99■■□□□ 1.91
FANCA-228ENST00000567943 AOC1P19801 751 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 MGAT5BQ3V5L5 792 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 ADGRF2Q8IZF7 708 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 PARD3BQ8TEW8 1205 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 C2orf15Q8WU43 125 aaKnown RBP26.99■■□□□ 1.91
FANCA-228ENST00000567943 KBTBD7Q8WVZ9 684 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 ELSPBP1Q96BH3 223 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 ARHGEF3Q9NR81 526 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 ABI2Q9NYB9 513 aaPredicted RBP26.99■■□□□ 1.91
FANCA-228ENST00000567943 FRMD4BQ9Y2L6 1034 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 ASB3Q9Y575 518 aa26.99■■□□□ 1.91
FANCA-228ENST00000567943 A0A1W2PRU2 124 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 LRRIQ3A6PVS8 624 aaPredicted RBP26.98■■□□□ 1.91
FANCA-228ENST00000567943 NR2F2P24468 414 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 TUFMP49411 452 aaKnown RBP26.98■■□□□ 1.91
FANCA-228ENST00000567943 SMARCB1Q12824 385 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 INTS6LQ5JSJ4 861 aaKnown RBP26.98■■□□□ 1.91
FANCA-228ENST00000567943 STXBP5Q5T5C0 1151 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 ZNF658Q5TYW1 1059 aaPredicted RBP26.98■■□□□ 1.91
FANCA-228ENST00000567943 DCP1BQ8IZD4 617 aaKnown RBP26.98■■□□□ 1.91
FANCA-228ENST00000567943 SPATA20Q8TB22 786 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 SPATA18Q8TC71 538 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 SPPL2BQ8TCT7 592 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 MKNK1Q9BUB5 465 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 OBSL1O75147 1896 aa26.98■■□□□ 1.91
FANCA-228ENST00000567943 TSPY1Q01534 308 aa26.97■■□□□ 1.91
FANCA-228ENST00000567943 NFIL3Q16649 462 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms