RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 ARID3BQ8IVW6 561 aaPredicted RBP16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 YAF2Q8IY57 180 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 DCP1BQ8IZD4 617 aaKnown RBP16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 LRRC52Q8N7C0 313 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 CXorf38Q8TB03 319 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 FAM200AQ8TCP9 573 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 NOC3LQ8WTT2 800 aaKnown RBP16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 FAM3CQ92520 227 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 SNX21Q969T3 373 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 LRRC27Q9C0I9 530 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 CUEDC2Q9H467 287 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 PCIF1Q9H4Z3 704 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 KBTBD4Q9NVX7 518 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 ABI2Q9NYB9 513 aaPredicted RBP16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 ITGA11Q9UKX5 1188 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 NDRG2Q9UN36 371 aaKnown RBP16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 AGAP1Q9UPQ3 857 aa16.22■□□□□ 0.19
SCAMP2-209ENST00000567638 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 KIAA0391O15091 583 aaKnown RBP16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 CHADO15335 359 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 CUTAO60888 179 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 CDC25CP30307 473 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 CSTF1Q05048 431 aaKnown RBP16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 GPD1LQ8N335 351 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 PDCL2Q8N4E4 241 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 GLIS3Q8NEA6 775 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 FAM84AQ96KN4 292 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 GCNAQ96QF7 691 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 TRIM9Q9C026 710 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 IL21Q9HBE4 155 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 PDE11AQ9HCR9 933 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 PRMT8Q9NR22 394 aaPredicted RBP16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 OBP2AQ9NY56 170 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 L1RE1Q9UN81 338 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 PCDHB5Q9Y5E4 795 aa16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 HELZP42694 1942 aaKnown RBP16.21■□□□□ 0.19
SCAMP2-209ENST00000567638 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 HUS1O60921 280 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 TMEM191BP0C7N4 346 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 WEE1P30291 646 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 MLLT6P55198 1093 aaPredicted RBP16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 CYP4F8P98187 520 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 TSPY1Q01534 308 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 BFSP1Q12934 665 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 SHC4Q6S5L8 630 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 TMEM86AQ8N2M4 240 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 CSGALNACT2Q8N6G5 542 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 GIPC2Q8TF65 315 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 LEO1Q8WVC0 666 aaPredicted RBP16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 HPS3Q969F9 1004 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 DHX58Q96C10 678 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 MSANTD3Q96H12 275 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 MTMR12Q9C0I1 747 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 CHRDQ9H2X0 955 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 TASP1Q9H6P5 420 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
SCAMP2-209ENST00000567638 OTOGLQ3ZCN5 2332 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 DPYSL4O14531 572 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 EIF3DO15371 548 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 PRAMEF12O95522 483 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 KRT19P08727 400 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 CCNE1P24864 410 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 ASIC1P78348 528 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 RBP5P82980 135 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 AMPD3Q01432 767 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 MTAPQ13126 283 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 TAF12Q16514 161 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 ARHGAP29Q52LW3 1261 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 SCARA3Q6AZY7 606 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 CNNM4Q6P4Q7 775 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 IQUBQ8NA54 791 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 NELL1Q92832 810 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 LRRC3BQ96PB8 259 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 ACBD6Q9BR61 282 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 IER2Q9BTL4 223 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 GDAP2Q9NXN4 497 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 DDX43Q9NXZ2 648 aaKnown RBP16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 SIX4Q9UIU6 781 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 PCDHGA2Q9Y5H1 932 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 SPTBN4Q9H254 2564 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 PTPRJQ12913 1337 aa16.19■□□□□ 0.18
SCAMP2-209ENST00000567638 SLC38A8A6NNN8 435 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 PDIA4P13667 645 aaKnown RBP16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 HOXD13P35453 343 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 MYL7Q01449 175 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 INTS6LQ5JSJ4 861 aaKnown RBP16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 FOXD4L5Q5VV16 416 aaPredicted RBP16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 LMBRD2Q68DH5 695 aaPredicted RBP16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 C1orf228Q6PIY5 440 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 TSSK4Q6SA08 328 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 EPM2AIP1Q7L775 607 aaPredicted RBP16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 CBWD2Q8IUF1 395 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 HSCBQ8IWL3 235 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 TOP6BLQ8N6T0 577 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 SUMF1Q8NBK3 374 aa16.18■□□□□ 0.18
SCAMP2-209ENST00000567638 ZBTB44Q8NCP5 570 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms