RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TRAPPC11Q7Z392 1133 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 GRASPQ7Z6J2 395 aaPredicted RBP14.41□□□□□ -0.1
CLK3-218ENST00000566926 DCP1BQ8IZD4 617 aaKnown RBP14.41□□□□□ -0.1
CLK3-218ENST00000566926 EDAQ92838 391 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 NXPE3Q969Y0 559 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 CCDC127Q96BQ5 260 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 CEP63Q96MT8 703 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 TRIM5Q9C035 493 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 SORCS3Q9UPU3 1222 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 INSL5Q9Y5Q6 135 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 TECTAO75443 2155 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 ZNF197O14709 1029 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 SERPINC1P01008 464 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 CDC25BP30305 580 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 LHX1P48742 406 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 STX17P56962 302 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 ZXDAP98168 799 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 MYL7Q01449 175 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 TSPY1Q01534 308 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 TRPC3Q13507 836 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 FILIP1LQ4L180 1135 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 PABPC1LQ4VXU2 614 aaKnown RBP14.4□□□□□ -0.1
CLK3-218ENST00000566926 ZCWPW2Q504Y3 356 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 WSCD1Q658N2 575 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 LMBRD2Q68DH5 695 aaPredicted RBP14.4□□□□□ -0.1
CLK3-218ENST00000566926 GET4Q7L5D6 327 aaPredicted RBP14.4□□□□□ -0.1
CLK3-218ENST00000566926 UBALD2Q8IYN6 164 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 TOP6BLQ8N6T0 577 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 OR5B17Q8NGF7 314 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 CXorf38Q8TB03 319 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 C2orf15Q8WU43 125 aaKnown RBP14.4□□□□□ -0.1
CLK3-218ENST00000566926 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 PDLIM2Q96JY6 352 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 ZNF512Q96ME7 567 aaPredicted RBP14.4□□□□□ -0.1
CLK3-218ENST00000566926 MED15Q96RN5 788 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 HSD3B7Q9H2F3 369 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 AVENQ9NQS1 362 aaPredicted RBP14.4□□□□□ -0.1
CLK3-218ENST00000566926 EPS15L1Q9UBC2 864 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 LIMD1Q9UGP4 676 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 SNX9Q9Y5X1 595 aa14.4□□□□□ -0.1
CLK3-218ENST00000566926 MAPK13O15264 365 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 PHACTR2O75167 634 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 SEC24AO95486 1093 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 ADCY5O95622 1261 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 ALDH1A3P47895 512 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 TUFMP49411 452 aaKnown RBP14.39□□□□□ -0.11
CLK3-218ENST00000566926 EPHB3P54753 998 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 FANCCQ00597 558 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 CYP4A22Q5TCH4 519 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 CEP135Q66GS9 1140 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 ANKRD40Q6AI12 368 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 LEMD2Q8NC56 503 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 TMC2Q8TDI7 906 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 PARD3BQ8TEW8 1205 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 DNMT3BQ9UBC3 853 aaKnown RBP14.39□□□□□ -0.11
CLK3-218ENST00000566926 PTPRJQ12913 1337 aa14.39□□□□□ -0.11
CLK3-218ENST00000566926 ZNF638Q14966 1978 aaKnown RBP14.38□□□□□ -0.11
CLK3-218ENST00000566926 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 LRRC10BA6NIK2 292 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 GOLGA6L6A8MZA4 724 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 PRR33A8MZF0 331 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 CETN3O15182 167 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 RHOP08100 348 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 FAM163BP0C2L3 166 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 OR4Q2P0C623 313 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 LAMP2P13473 410 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 NR2F2P24468 414 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 PCSK1P29120 753 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 ATICP31939 592 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 ZNF75DP51815 510 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 ENPEPQ07075 957 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 SIGLEC14Q08ET2 396 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 TWF1Q12792 350 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 DUSP4Q13115 394 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 NFE2Q16621 373 aaPredicted RBP14.38□□□□□ -0.11
CLK3-218ENST00000566926 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 TCP11X2Q5H9J9 407 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 ZC3H3Q8IXZ2 948 aaKnown RBP14.38□□□□□ -0.11
CLK3-218ENST00000566926 ADGRF2Q8IZF7 708 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 SPPL2BQ8TCT7 592 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 PGLYRP2Q96PD5 576 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 MYADMQ96S97 322 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 LIMA1Q9UHB6 759 aaKnown RBP14.38□□□□□ -0.11
CLK3-218ENST00000566926 CDH7Q9ULB5 785 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 L1RE1Q9UN81 338 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 MRPS23Q9Y3D9 190 aaKnown RBP14.38□□□□□ -0.11
CLK3-218ENST00000566926 YIPF1Q9Y548 306 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 ASB3Q9Y575 518 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 MYH10P35580 1976 aa14.38□□□□□ -0.11
CLK3-218ENST00000566926 DENND4CQ5VZ89 1909 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms