RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ARFIP2P53365 341 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 BPIFB4P59827 614 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 MAMLD1Q13495 774 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 SESTD1Q86VW0 696 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 PPFIBP2Q8ND30 876 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 VCPIP1Q96JH7 1222 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 TRIM4Q9C037 500 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 MRPL47Q9HD33 250 aaKnown RBP16.51■□□□□ 0.23
COMMD4-215ENST00000566843 TAS2R1Q9NYW7 299 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-215ENST00000566843 ZNF148Q9UQR1 794 aa16.51■□□□□ 0.23
COMMD4-215ENST00000566843 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 ETS1P14921 441 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 KCNA3P22001 575 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 PIK3CAP42336 1068 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 RAP1GDS1P52306 607 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 JAG1P78504 1218 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 CYP24A1Q07973 514 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 TCP10Q12799 353 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 OVGP1Q12889 678 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 PDIA2Q13087 525 aaKnown RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 OASLQ15646 514 aaKnown RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 PDCD2Q16342 344 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 HP1BP3Q5SSJ5 553 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 NLRX1Q86UT6 975 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 TCP10LQ8TDR4 215 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 WDR60Q8WVS4 1066 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 RBM41Q96IZ5 413 aaKnown RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 FGD4Q96M96 766 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 SLITRK1Q96PX8 696 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 NR1H4Q96RI1 486 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 KRT82Q9NSB4 513 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 TBX20Q9UMR3 447 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 MAP3K7O43318 606 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 DHRS4L1P0CG22 281 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 RARBP10826 455 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 PEX3P56589 373 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 DLGAP5Q15398 846 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 AOC3Q16853 763 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 TRIM72Q6ZMU5 477 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 ZC3H18Q86VM9 953 aaKnown RBP16.5■□□□□ 0.23
COMMD4-215ENST00000566843 CHSY1Q86X52 802 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 MAP4K3Q8IVH8 894 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 VPS52Q8N1B4 723 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 MCUR1Q96AQ8 359 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 ELMO3Q96BJ8 720 aa16.5■□□□□ 0.23
COMMD4-215ENST00000566843 PTPN7P35236 360 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 STAT2P52630 851 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 CACNB3P54284 484 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 VCPP55072 806 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 MCL1Q07820 350 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 C2CD6Q53TS8 623 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 CAPN12Q6ZSI9 719 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 PHF13Q86YI8 300 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 PTPRN2Q92932 1015 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 NKD2Q969F2 451 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 ZNF184Q99676 751 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 CCDC28BQ9BUN5 200 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 MRIQ9BWK5 157 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 TSSK1BQ9BXA7 367 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 TMEM120AQ9BXJ8 343 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 PCDH9Q9HC56 1237 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 FARP1Q9Y4F1 1045 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 A0A0G2JND7 137 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 WDR91A4D1P6 747 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 F8W8V4 182 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 DDX39AO00148 427 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 DHX15O43143 795 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 MAGEC1O60732 1142 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 RNF8O76064 485 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 KRT10P13645 584 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 SERPINB3P29508 390 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 DSG3P32926 999 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 PHBP35232 272 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 NOMO3P69849 1222 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 NOP14P78316 857 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 SEPT7Q16181 437 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 C15orf39Q6ZRI6 1047 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 USP37Q86T82 979 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 KBTBD2Q8IY47 623 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 STMN2Q93045 179 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 AZIN2Q96A70 460 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 MRRFQ96E11 262 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 PRR11Q96HE9 360 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 RANBP17Q9H2T7 1088 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 ACSS3Q9H6R3 686 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 METTL5Q9NRN9 209 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 SLC17A7Q9P2U7 560 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 MRPL11Q9Y3B7 192 aaKnown RBP16.49■□□□□ 0.23
COMMD4-215ENST00000566843 SCINQ9Y6U3 715 aa16.49■□□□□ 0.23
COMMD4-215ENST00000566843 DENND3A2RUS2 1198 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 ITGAVP06756 1048 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 DLDP09622 509 aaKnown RBP16.48■□□□□ 0.23
COMMD4-215ENST00000566843 GLRA2P23416 452 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 PRKD1Q15139 912 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-215ENST00000566843 KLHL38Q2WGJ6 581 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
COMMD4-215ENST00000566843 MFSD7Q6UXD7 560 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms