RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PCDHB5Q9Y5E4 795 aa29.83■■■□□ 2.37
UBFD1-206ENST00000566669 PDIA4P13667 645 aaKnown RBP29.82■■■□□ 2.36
UBFD1-206ENST00000566669 DDX6P26196 483 aaKnown RBP eCLIP29.82■■■□□ 2.36
UBFD1-206ENST00000566669 KPNA1P52294 538 aaPredicted RBP29.82■■■□□ 2.36
UBFD1-206ENST00000566669 WSCD1Q658N2 575 aa29.82■■■□□ 2.36
UBFD1-206ENST00000566669 CUEDC2Q9H467 287 aa29.82■■■□□ 2.36
UBFD1-206ENST00000566669 PANK4Q9NVE7 773 aa29.82■■■□□ 2.36
UBFD1-206ENST00000566669 RBAKQ9NYW8 714 aaPredicted RBP29.82■■■□□ 2.36
UBFD1-206ENST00000566669 NCDNQ9UBB6 729 aa29.82■■■□□ 2.36
UBFD1-206ENST00000566669 EXTL3O43909 919 aa29.81■■■□□ 2.36
UBFD1-206ENST00000566669 HUS1O60921 280 aa29.81■■■□□ 2.36
UBFD1-206ENST00000566669 HAPLN1P10915 354 aaPredicted RBP29.81■■■□□ 2.36
UBFD1-206ENST00000566669 TFAMQ00059 246 aaKnown RBP29.81■■■□□ 2.36
UBFD1-206ENST00000566669 CEBPZQ03701 1054 aaKnown RBP29.81■■■□□ 2.36
UBFD1-206ENST00000566669 DGKKQ5KSL6 1271 aa29.81■■■□□ 2.36
UBFD1-206ENST00000566669 TTC9BQ8N6N2 239 aa29.81■■■□□ 2.36
UBFD1-206ENST00000566669 LEO1Q8WVC0 666 aaPredicted RBP29.81■■■□□ 2.36
UBFD1-206ENST00000566669 MKNK1Q9BUB5 465 aa29.81■■■□□ 2.36
UBFD1-206ENST00000566669 ABCB6Q9NP58 842 aa29.81■■■□□ 2.36
UBFD1-206ENST00000566669 R3HCC1Q9Y3T6 440 aaKnown RBP29.81■■■□□ 2.36
UBFD1-206ENST00000566669 COL4A3Q01955 1670 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 SDHBP21912 280 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 CCNE1P24864 410 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 NASPP49321 788 aaPredicted RBP29.8■■■□□ 2.36
UBFD1-206ENST00000566669 KIAA2013Q8IYS2 634 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 BPIFB1Q8TDL5 484 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 USP28Q96RU2 1077 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 ACBD6Q9BR61 282 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 TNMDQ9H2S6 317 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 TBC1D7Q9P0N9 293 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 MTMR6Q9Y217 621 aa29.8■■■□□ 2.36
UBFD1-206ENST00000566669 MYBPHLA2RUH7 354 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 STX6O43752 255 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 CHRNB1P11230 501 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 ATF6P18850 670 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 AMPD3Q01432 767 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 MYL7Q01449 175 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 KCNA1Q09470 495 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 SURF1Q15526 300 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 SYNPOQ8N3V7 929 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 SPEM1Q8N4L4 309 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 CELF5Q8N6W0 485 aaKnown RBP29.79■■■□□ 2.36
UBFD1-206ENST00000566669 GDAP2Q9NXN4 497 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 ABI2Q9NYB9 513 aaPredicted RBP29.79■■■□□ 2.36
UBFD1-206ENST00000566669 TSC2P49815 1807 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 COL4A2P08572 1712 aa29.79■■■□□ 2.36
UBFD1-206ENST00000566669 SOAT2O75908 522 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 CSH1P0DML2 217 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 CSH2P0DML3 217 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 POLR2BP30876 1174 aaKnown RBP29.78■■■□□ 2.36
UBFD1-206ENST00000566669 CXCL12P48061 93 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 RBP5P82980 135 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 STXBP5Q5T5C0 1151 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 RSPRY1Q96DX4 576 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 LPIN3Q9BQK8 851 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 KIAA1586Q9HCI6 787 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 UXTQ9UBK9 157 aaPredicted RBP29.78■■■□□ 2.36
UBFD1-206ENST00000566669 AGAP1Q9UPQ3 857 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 SMG5Q9UPR3 1016 aaKnown RBP29.78■■■□□ 2.36
UBFD1-206ENST00000566669 ANK1P16157 1881 aa29.78■■■□□ 2.36
UBFD1-206ENST00000566669 CACNA1AO00555 2505 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 PAPSS2O95340 614 aaPredicted RBP29.77■■■□□ 2.36
UBFD1-206ENST00000566669 ITGB3P05106 788 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 LHX1P48742 406 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 RPL10AP62906 217 aaKnown RBP29.77■■■□□ 2.36
UBFD1-206ENST00000566669 PUM1Q14671 1186 aaKnown RBP eCLIP29.77■■■□□ 2.36
UBFD1-206ENST00000566669 STK38Q15208 465 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 FAM173BQ6P4H8 233 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 LRRTM3Q86VH5 581 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 C1orf127Q8N9H9 656 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 ZNF396Q96N95 335 aaPredicted RBP29.77■■■□□ 2.36
UBFD1-206ENST00000566669 KIF9Q9HAQ2 790 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 IL21Q9HBE4 155 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 RAB23Q9ULC3 237 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 SCN1AP35498 2009 aa29.77■■■□□ 2.36
UBFD1-206ENST00000566669 NCANO14594 1321 aa29.76■■■□□ 2.36
UBFD1-206ENST00000566669 SPECC1L-ADORA2AF8WAN1 911 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 K7ELQ4 463 aaPredicted RBP29.76■■■□□ 2.35
UBFD1-206ENST00000566669 PPP6R2O75170 966 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 PCSK1P29120 753 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 CTHP32929 405 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 AVPR1AP37288 418 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 MYO1EQ12965 1108 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 DPH6Q7L8W6 267 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 CMTM8Q8IZV2 173 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 GPD1LQ8N335 351 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 PDCL2Q8N4E4 241 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 CSGALNACT2Q8N6G5 542 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 TOP6BLQ8N6T0 577 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 SAAL1Q96ER3 474 aa29.76■■■□□ 2.35
UBFD1-206ENST00000566669 TICRRQ7Z2Z1 1910 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 SLC38A8A6NNN8 435 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 TMEM191BP0C7N4 346 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 TDGF1P13385 188 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 CNR2P34972 360 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 CASP5P51878 434 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 AMPD2Q01433 879 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 LINC00301Q8NCQ3 95 aa29.75■■■□□ 2.35
UBFD1-206ENST00000566669 MRPS31Q92665 395 aaKnown RBP29.75■■■□□ 2.35
UBFD1-206ENST00000566669 ANKRD36BP1Q96IX9 119 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms