RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CST8O60676 142 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 DEAF1O75398 565 aaPredicted RBP14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 PGK2P07205 417 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 KCNK10P57789 538 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 DGKDQ16760 1214 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 EPC2Q52LR7 807 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 EFHC1Q5JVL4 640 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 GALNT4Q8N4A0 578 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 PPP1R2P1Q96PQ5 205 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 ABI2Q9NYB9 513 aaPredicted RBP14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 ERAP1Q9NZ08 941 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 JCADQ9P266 1359 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 TBX3O15119 743 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 LRG1P02750 347 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 SLC9A1P19634 815 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 PTPN7P35236 360 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 TBL3Q12788 808 aaKnown RBP14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 PWP1Q13610 501 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 CYP4A22Q5TCH4 519 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 GPRC5AQ8NFJ5 357 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 CRAMP1Q96RY5 1269 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 KLC4Q9NSK0 619 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 SLC39A10Q9ULF5 831 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 UBXN8O00124 270 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 COMTP21964 271 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 PTK6Q13882 451 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 CCDC142Q17RM4 750 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 ARHGEF40Q8TER5 1519 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 KCNK16Q96T55 309 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 THTPAQ9BU02 230 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 CINPQ9BW66 212 aaPredicted RBP14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 PRMT7Q9NVM4 692 aaPredicted RBP14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 KCND2Q9NZV8 630 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 ENTPD3O75355 529 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 FMR1Q06787 632 aaKnown RBP eCLIP14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 HIST2H2ACQ16777 129 aaPredicted RBP14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 CCDC157Q569K6 752 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 HIST2H2AA3Q6FI13 130 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 VPS37AQ8NEZ2 397 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 HPDLQ96IR7 371 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 OSBPL10Q9BXB5 764 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 RIC8BQ9NVN3 520 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 PCDHB2Q9Y5E7 798 aa14.19□□□□□ -0.14
CX3CL1-204ENST00000565912 FAM47DPA6NHR8 397 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 SLC25A27O95847 323 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 BRD2P25440 801 aaKnown RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 POU4F1Q01851 419 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 BTKQ06187 659 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 DPYDQ12882 1025 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 STK4Q13043 487 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 CDH18Q13634 790 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 TDRD10Q5VZ19 366 aaKnown RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 CDR2LQ86X02 465 aaPredicted RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 MXRA8Q9BRK3 442 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 PHF20L1A8MW92 1017 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 PPP1R37O75864 691 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 SNRPAP09012 282 aaKnown RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 PTGER2P43116 358 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 TP53BP2Q13625 1128 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 MFSD4BQ5TF39 518 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 OR2W6PQ8NHA6 318 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 CYFIP2Q96F07 1278 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 TMEM8AQ9HCN3 771 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 RAD18Q9NS91 495 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 EXTL3O43909 919 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 ALDH1A2O94788 518 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 FAM200BP0CF97 657 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 MAGEA4P43358 317 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 RUNX1T1Q06455 604 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 R3HDM1Q15032 1099 aaKnown RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 NAB2Q15742 525 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 TTC39BQ5VTQ0 682 aaPredicted RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 NOTUMQ6P988 496 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 ZNF669Q96BR6 464 aaPredicted RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 USE1Q9NZ43 259 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 CAB39Q9Y376 341 aaPredicted RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 EVPLLA8MZ36 301 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 HBP1O60381 514 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 SLC16A1P53985 500 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 ATG9AQ7Z3C6 839 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 FAM71DQ8N9W8 422 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 PRPF18Q99633 342 aaKnown RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 NIF3L1Q9GZT8 377 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 ALDH8A1Q9H2A2 487 aaPredicted RBP14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 GID8Q9NWU2 228 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 SMARCAL1Q9NZC9 954 aa14.18□□□□□ -0.14
CX3CL1-204ENST00000565912 HUNKP57058 714 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 ANGPT1Q15389 498 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 ERAP2Q6P179 960 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 TRAPPC11Q7Z392 1133 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 SGF29Q96ES7 293 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 KLK14Q9P0G3 267 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 TRIM10Q9UDY6 481 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 RASSF10A6NK89 507 aa14.17□□□□□ -0.14
CX3CL1-204ENST00000565912 PSMD14O00487 310 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms