RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 PPP1R2P3Q6NXS1 205 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 TRIM72Q6ZMU5 477 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 GLYCTKQ8IVS8 523 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 TMEM130Q8N3G9 435 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 TET1Q8NFU7 2136 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 OLIG1Q8TAK6 271 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 MMS19Q96T76 1030 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 EPHX3Q9H6B9 360 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 SMYD3Q9H7B4 428 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 MTUS1Q9ULD2 1270 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 KIAA1257Q9ULG3 409 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 SNX9Q9Y5X1 595 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 TTC3P53804 2025 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 MICAL3Q7RTP6 2002 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 CILPO75339 1184 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 TACC1O75410 805 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 LILRA4P59901 499 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 FMO1Q01740 532 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 IKBKEQ14164 716 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 NOMO2Q5JPE7 1267 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 LIMS2Q7Z4I7 341 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 SPRED2Q7Z698 418 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 TOP6BLQ8N6T0 577 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 SLC20A1Q8WUM9 679 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 SDCBP2Q9H190 292 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 GOLGA2P5Q9HBQ8 144 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 RNF19AQ9NV58 838 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 MYO1AQ9UBC5 1043 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 LRFN2Q9ULH4 789 aa20.33■□□□□ 0.85
CSPG4P13-201ENST00000565545 ABHD14A-ACY1A0A1B0GW23 586 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 PODXLO00592 558 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 LPXNO60711 386 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 POMCP01189 267 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 H2AFZP0C0S5 128 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 ARHGAP25P42331 645 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 AFF1P51825 1210 aaKnown RBP20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 CDH8P55286 799 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 DEFB103AP81534 67 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 H2AFVQ71UI9 128 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 UNC93AQ86WB7 457 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 RAD9AQ99638 391 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 LZTFL1Q9NQ48 299 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 SEPT11Q9NVA2 429 aaKnown RBP20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 INPP5FQ9Y2H2 1132 aa20.32■□□□□ 0.84
CSPG4P13-201ENST00000565545 BTNL10A8MVZ5 291 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 MED7O43513 233 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 KIF5CO60282 957 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 HUS1O60921 280 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 EFCAB14O75071 495 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 RTN2O75298 545 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 MMEP08473 750 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 IBSPP21815 317 aaPredicted RBP20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 RAP1GAPP47736 663 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 RAD23BP54727 409 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 UPP1Q16831 310 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 CLLU1OSQ5K130 101 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 TAF3Q5VWG9 929 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 FAM117BQ6P1L5 589 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 NPAS4Q8IUM7 802 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 ABI1Q8IZP0 508 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 APPL2Q8NEU8 664 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 GDPD5Q8WTR4 605 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 ZNF606Q8WXB4 792 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 TMEM176AQ96HP8 235 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 NT5C1AQ9BXI3 368 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 ISCUQ9H1K1 167 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 RRAGDQ9NQL2 400 aaPredicted RBP20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 LMCD1Q9NZU5 365 aa20.31■□□□□ 0.84
CSPG4P13-201ENST00000565545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 ARHGEF37A1IGU5 675 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 THAP12O43422 761 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 GJB5O95377 273 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 CLCNKBP51801 687 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 SOWAHAQ2M3V2 549 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 DCLRE1AQ6PJP8 1040 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 CRIPAKQ8N1N5 446 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 RNF10Q8N5U6 811 aaKnown RBP20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 SPATA18Q8TC71 538 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 WHAMMQ8TF30 809 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 C16orf45Q96MC5 204 aaPredicted RBP20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 PCDHB18PQ96TA0 734 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 LRFN3Q9BTN0 628 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 MRPL9Q9BYD2 267 aaKnown RBP20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 PDCL3Q9H2J4 239 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 ACP6Q9NPH0 428 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 PCDHGC3Q9UN70 934 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 HCN4Q9Y3Q4 1203 aa20.3■□□□□ 0.84
CSPG4P13-201ENST00000565545 ANKRD62A6NC57 917 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 RCCD1A6NED2 376 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 SPTLC1O15269 473 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 VDRP11473 427 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 TNNT1P13805 278 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 AARSP49588 968 aaKnown RBP eCLIP20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 NDST1P52848 882 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 ETF1P62495 437 aaKnown RBP20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 DSC1Q08554 894 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 STILQ15468 1287 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 CLEC16AQ2KHT3 1053 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 TCTN1Q2MV58 587 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 TMEM31Q5JXX7 168 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms