RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MAPK4P31152 587 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 EPHX2P34913 555 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 NSFP46459 744 aaKnown RBP7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 NOP14P78316 857 aaKnown RBP7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 CCNA1P78396 465 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 DR1Q01658 176 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 PTP4A2Q12974 167 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 PLCB4Q15147 1175 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 DUOXA2Q1HG44 320 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 SGSM1Q2NKQ1 1148 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 LIN9Q5TKA1 542 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 DUPD1Q68J44 220 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 EEPD1Q7L9B9 569 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 ABRAQ8N0Z2 381 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 RNF149Q8NC42 400 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 RELTQ969Z4 430 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 SPATA33Q96N06 139 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 TCHPQ9BT92 498 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 FZD8Q9H461 694 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.71□□□□□ -1.176e-6■■■■■ 48.1
HERPUD1-209ENST00000564678 ANKFY1Q9P2R3 1169 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 ZBTB42B2RXF5 422 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 MYO1FO00160 1098 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 ATMINO43313 823 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 FAM189A1O60320 539 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 ASS1P00966 412 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 PRKCBP05771 671 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 PGK2P07205 417 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 TXNP10599 105 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 PROZP22891 400 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 FNTAP49354 379 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 WNT7BP56706 349 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 LAMC2Q13753 1193 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF484Q5JVG2 852 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 LMBRD2Q68DH5 695 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 PHF13Q86YI8 300 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 SLC13A5Q86YT5 568 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 UBR7Q8N806 425 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 C12orf50Q8NA57 414 aaPredicted RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 KRT35Q92764 455 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF518BQ9C0D4 1074 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 APOBEC3GQ9HC16 384 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 PTPRHQ9HD43 1115 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 CWC15Q9P013 229 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 CPSF3Q9UKF6 684 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 NR2E1Q9Y466 385 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 PCDHB4Q9Y5E5 795 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 PTPRJQ12913 1337 aa7.71□□□□□ -1.18
HERPUD1-209ENST00000564678 ABLIM1O14639 778 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 FSCN2O14926 492 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MAGEB2O15479 319 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 DAPK3O43293 454 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 STRNO43815 780 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 B4GALT4O60513 344 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SHOX2O60902 331 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 EDN1P05305 212 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 IVLP07476 585 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 PYGMP11217 842 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 GUCY2FP51841 1108 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SKOR1P84550 965 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 DRP2Q13474 957 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 TRADDQ15628 312 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 PTPRNQ16849 979 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 TMEM270Q6UE05 265 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MPZL3Q6UWV2 235 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 RUFY4Q6ZNE9 571 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MON1BQ7L1V2 547 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ZBTB33Q86T24 672 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 FAM169BQ8N8A8 192 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 PRELID2Q8N945 189 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 OR5B17Q8NGF7 314 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 EPS8L3Q8TE67 593 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SLCO2A1Q92959 643 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MAGOHBQ96A72 148 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 CYFIP2Q96F07 1278 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 EAF1Q96JC9 268 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 USB1Q9BQ65 265 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SYT17Q9BSW7 474 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 LRRC19Q9H756 370 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ERAP1Q9NZ08 941 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 FEZ2Q9UHY8 353 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ANAPC7Q9UJX3 599 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SCINQ9Y6U3 715 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 GOLGA6L10A6NI86 522 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 TMEM110-MUSTN1A8MSY1 372 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SRGAP2CP0DJJ0 459 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MARK3P27448 753 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MAN1A1P33908 653 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 HSD17B3P37058 310 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 PTGIRP43119 386 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SCTRP47872 440 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF132P52740 706 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 EIF3BP55884 814 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 YWHAEP62258 255 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 NOMO3P69849 1222 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ZSCAN26Q16670 478 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms