RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 FAM171BQ6P995 826 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 SMYD4Q8IYR2 804 aaPredicted RBP15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 ERCC4Q92889 916 aaPredicted RBP15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 MKNK1Q9BUB5 465 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 ZNF334Q9HCZ1 680 aaPredicted RBP15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 POLIQ9UNA4 740 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 SLC27A5Q9Y2P5 690 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 PCDHA5Q9Y5H7 936 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 SNX9Q9Y5X1 595 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 NUMBLQ9Y6R0 609 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 USP34Q70CQ2 3546 aa15.9■□□□□ 0.14
RPUSD1-204ENST00000563560 CACNA1HO95180 2353 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 AKAP3O75969 853 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 TNNC2P02585 160 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 KRT19P08727 400 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 HAPLN1P10915 354 aaPredicted RBP15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 NPR3P17342 541 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 BMP6P22004 513 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 WARSP23381 471 aaKnown RBP15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 INTS6LQ5JSJ4 861 aaKnown RBP15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 ST13P5Q8NFI4 369 aaPredicted RBP15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 SHKBP1Q8TBC3 707 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 TMC2Q8TDI7 906 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 C2orf15Q8WU43 125 aaKnown RBP15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 PSMG2Q969U7 264 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 GSDMAQ96QA5 445 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 CORO1BQ9BR76 489 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 IL21Q9HBE4 155 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 DDX43Q9NXZ2 648 aaKnown RBP15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 MAPK8IP1Q9UQF2 711 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 TICRRQ7Z2Z1 1910 aa15.89■□□□□ 0.13
RPUSD1-204ENST00000563560 HELZP42694 1942 aaKnown RBP15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 HUS1O60921 280 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 TACC1O75410 805 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 FAM163BP0C2L3 166 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 TNNI1P19237 187 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 ACAT1P24752 427 aaKnown RBP15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 LMO2P25791 158 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 PRCPP42785 496 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 CDR1P51861 262 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 MYL6P60660 151 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 ENPEPQ07075 957 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 SMARCB1Q12824 385 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 EDRF1Q3B7T1 1238 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 ZACNQ401N2 412 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 IER5LQ5T953 404 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 GAREM2Q75VX8 874 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 TMEM150AQ86TG1 271 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 METTL23Q86XA0 190 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 ADGRF2Q8IZF7 708 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 SPPL2BQ8TCT7 592 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 ING5Q8WYH8 240 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 ZSWIM3Q96MP5 696 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 LPIN3Q9BQK8 851 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 MRPL45Q9BRJ2 306 aaKnown RBP15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 PLA2G2FQ9BZM2 168 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 CRTAC1Q9NQ79 661 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 SLC2A4RGQ9NR83 387 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 GDE1Q9NZC3 331 aa15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 MRPS23Q9Y3D9 190 aaKnown RBP15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 ARIH1Q9Y4X5 557 aaPredicted RBP15.88■□□□□ 0.13
RPUSD1-204ENST00000563560 MYBPHLA2RUH7 354 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 KRBA1A5PL33 1030 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 SHISA7A6NL88 538 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 ATP2C2O75185 946 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 SRFP11831 508 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 HMGA1P17096 107 aaKnown RBP15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 NR2F2P24468 414 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 LHX1P48742 406 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 PMS1P54277 932 aaKnown RBP15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 VCPP55072 806 aaKnown RBP15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 MYO1EQ12965 1108 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 CFAP221Q4G0U5 840 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 ZNF658Q5TYW1 1059 aaPredicted RBP15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 CWF19L1Q69YN2 538 aaKnown RBP15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 DNAJB7Q7Z6W7 309 aaPredicted RBP15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 ADSSL1Q8N142 457 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 THEM5Q8N1Q8 247 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 FBXL6Q8N531 539 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 LEMD2Q8NC56 503 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 FNBP1Q96RU3 617 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 SDCBP2Q9H190 292 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 TRPV4Q9HBA0 871 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 ABCB6Q9NP58 842 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 ASB3Q9Y575 518 aa15.87■□□□□ 0.13
RPUSD1-204ENST00000563560 MIA3Q5JRA6 1907 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 IKBKBO14920 756 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 CALUO43852 315 aaPredicted RBP15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 ECI2O75521 394 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 GJA1P17302 382 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 ATICP31939 592 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 GPR15P49685 360 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 AP3M2P53677 418 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 PPP3CAQ08209 521 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 PLD1Q13393 1074 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 CLEC17AQ6ZS10 378 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 SV2AQ7L0J3 742 aa15.86■□□□□ 0.13
RPUSD1-204ENST00000563560 DCP1BQ8IZD4 617 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms