RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 UAP1L1Q3KQV9 507 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 DACT2Q5SW24 774 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 PPP4R3AQ6IN85 833 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 KIAA1161Q6NSJ0 714 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 SLC29A4Q7RTT9 530 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 RHOT1Q8IXI2 618 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 MIER2Q8N344 545 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 OR2I1PQ8NGU4 316 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 CCHCR1Q8TD31 782 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 NSMCE1Q8WV22 266 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 DPF2Q92785 391 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 QTRT1Q9BXR0 403 aaKnown RBP4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 C11orf54Q9H0W9 315 aaPredicted RBP4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 TDP1Q9NUW8 608 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 EHD3Q9NZN3 535 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 SH3BP4Q9P0V3 963 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 E7ENX8 843 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 SGTAO43765 313 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 DTNBO60941 627 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 DDCP20711 480 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 SCP2P22307 547 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 CDC42EP1Q00587 391 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 TAP2Q03519 686 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 MTM1Q13496 603 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 TRIP6Q15654 476 aaKnown RBP4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 PROSER3Q2NL68 480 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 SUPT20HL1Q3ZLR7 823 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 CEP78Q5JTW2 689 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 TMEM240Q5SV17 173 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 PRAMEF17Q5VTA0 474 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 SLC2A7Q6PXP3 512 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 ZNF66Q6ZN08 573 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 ZNF804AQ7Z570 1209 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 RSPH3Q86UC2 560 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 CNGA4Q8IV77 575 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 AASDHPPTQ9NRN7 309 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 SERGEFQ9UGK8 458 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 LRP12Q9Y561 859 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 IPPQ9Y573 584 aa4.08□□□□□ -1.76
HDGFL3-202ENST00000562702 MYBBP1AQ9BQG0 1328 aaKnown RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 CCDC154A6NI56 674 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 KCNU1A8MYU2 1149 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 HTRA2O43464 458 aaPredicted RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 AGFG2O95081 481 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 MTHFD1P11586 935 aaKnown RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 ZFXP17010 805 aaPredicted RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 VCAM1P19320 739 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 NPTX2P47972 431 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 BMPR2Q13873 1038 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 ODF1Q14990 250 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 RABEP1Q15276 862 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 ZNF551Q7Z340 670 aaPredicted RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 MRPL10Q7Z7H8 261 aaKnown RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 AOPEPQ8N6M6 819 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 FANCBQ8NB91 859 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 TBC1D5Q92609 795 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 COA7Q96BR5 231 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 SH2D3AQ9BRG2 576 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 TLR10Q9BXR5 811 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 PRSS22Q9GZN4 317 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 CTTNBP2NLQ9P2B4 639 aa4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 LUC7L2Q9Y383 392 aaKnown RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 CFAP20Q9Y6A4 193 aaKnown RBP4.07□□□□□ -1.76
HDGFL3-202ENST00000562702 NISCHQ9Y2I1 1504 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 ADGRA2Q96PE1 1338 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 CCDC187A0A096LP49 1063 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 E2F8A0AVK6 867 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 SMIM22K7EJ46 135 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 SOCS2O14508 198 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 TRIAP1O43715 76 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 ALDH1L1O75891 902 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 NXPH3O95157 252 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 IL33O95760 270 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 AMY1AP04745 511 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 FAM163BP0C2L3 166 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 CTXN1P60606 82 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 ATP8B2P98198 1209 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 RAB39AQ14964 217 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 UTP14CQ5TAP6 766 aaKnown RBP4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 CPA6Q8N4T0 437 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 ZGPATQ8N5A5 531 aaKnown RBP4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 STAG1Q8WVM7 1258 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 TMX3Q96JJ7 454 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 TPSD1Q9BZJ3 242 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 SPRTNQ9H040 489 aaPredicted RBP4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 LIMCH1Q9UPQ0 1083 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 PCDHA13Q9Y5I0 950 aa4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.06□□□□□ -1.76
HDGFL3-202ENST00000562702 A0A0B4J269 797 aa4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 PRRT4C9JH25 899 aa4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 SUN1O94901 812 aa4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 ZRANB2O95218 330 aaKnown RBP eCLIP4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 CT47B1P0C2W7 299 aaPredicted RBP4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 EDNRBP24530 442 aa4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 ZNF134P52741 427 aa4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 TARDBPQ13148 414 aaKnown RBP eCLIP4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 TUBB3Q13509 450 aa4.05□□□□□ -1.76
HDGFL3-202ENST00000562702 IL10RAQ13651 578 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms