RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SLC39A12Q504Y0 691 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 INTS6LQ5JSJ4 861 aaKnown RBP17.9■□□□□ 0.46
CLK3-207ENST00000562389 CBWD3Q5JTY5 395 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 CBWD5Q5RIA9 395 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 FBXL13Q8NEE6 735 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 C2orf15Q8WU43 125 aaKnown RBP17.9■□□□□ 0.46
CLK3-207ENST00000562389 SMG7Q92540 1137 aaKnown RBP17.9■□□□□ 0.46
CLK3-207ENST00000562389 PGLYRP2Q96PD5 576 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 MRPL45Q9BRJ2 306 aaKnown RBP17.9■□□□□ 0.46
CLK3-207ENST00000562389 PHF7Q9BWX1 381 aaPredicted RBP17.9■□□□□ 0.46
CLK3-207ENST00000562389 POMKQ9H5K3 350 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 POLIQ9UNA4 740 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 COQ4Q9Y3A0 265 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 INSL5Q9Y5Q6 135 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 PMM2O15305 246 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 XYLBO75191 536 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 NOP14P78316 857 aaKnown RBP17.89■□□□□ 0.45
CLK3-207ENST00000562389 KLHL40Q2TBA0 621 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 SASS6Q6UVJ0 657 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 LRRTM3Q86VH5 581 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 TRIM59Q8IWR1 403 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 ADHFE1Q8IWW8 467 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 PKMYT1Q99640 499 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 SMYD3Q9H7B4 428 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 RAB20Q9NX57 234 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 CDH9Q9ULB4 789 aa17.89■□□□□ 0.45
CLK3-207ENST00000562389 CCL16O15467 120 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 HCRTO43612 131 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 N4BP1O75113 896 aaKnown RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 LRG1P02750 347 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 ACAT1P24752 427 aaKnown RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 LMO2P25791 158 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 ASPAP45381 313 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 FMO5P49326 533 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 ZP2Q05996 745 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 NFE2Q16621 373 aaPredicted RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 STX1AQ16623 288 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 TPD52L1Q16890 204 aaPredicted RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 SPOPLQ6IQ16 392 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 CAVIN1Q6NZI2 390 aaKnown RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 SCARA5Q6ZMJ2 495 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 ATAD1Q8NBU5 361 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 SPPL2BQ8TCT7 592 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 SEMA4DQ92854 862 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 ELMO3Q96BJ8 720 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 FAXDC2Q96IV6 333 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 CNOT6LQ96LI5 555 aaKnown RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 UHRF1Q96T88 793 aaPredicted RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 SYT15Q9BQS2 421 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 PI4K2AQ9BTU6 479 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 BCO2Q9BYV7 579 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 CRISPLD1Q9H336 500 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 SNX25Q9H3E2 840 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 THAP9Q9H5L6 903 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 PIDD1Q9HB75 910 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 APOBEC3GQ9HC16 384 aaKnown RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 WDR6Q9NNW5 1121 aaKnown RBP17.88■□□□□ 0.45
CLK3-207ENST00000562389 ANO10Q9NW15 660 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 YIPF1Q9Y548 306 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 PTPRDP23468 1912 aa17.88■□□□□ 0.45
CLK3-207ENST00000562389 P4HA2O15460 535 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 GNL1P36915 607 aaPredicted RBP17.87■□□□□ 0.45
CLK3-207ENST00000562389 DUSP4Q13115 394 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 PLD1Q13393 1074 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 FAM171BQ6P995 826 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 OR6B3Q8NGW1 331 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 NIF3L1Q9GZT8 377 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 SDCBP2Q9H190 292 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 TMLHEQ9NVH6 421 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 NME7Q9Y5B8 376 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 PCDHB5Q9Y5E4 795 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLK3-207ENST00000562389 CLUHO75153 1309 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 DOCK6Q96HP0 2047 aa17.87■□□□□ 0.45
CLK3-207ENST00000562389 NOTCH4Q99466 2003 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 C19orf67A6NJJ6 358 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 LRRN2O75325 713 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 RAP1GAPP47736 663 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 TUFMP49411 452 aaKnown RBP17.86■□□□□ 0.45
CLK3-207ENST00000562389 CDH8P55286 799 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 TWF1Q12792 350 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 KCNH2Q12809 1159 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 MAPRE1Q15691 268 aaKnown RBP17.86■□□□□ 0.45
CLK3-207ENST00000562389 WDR44Q5JSH3 913 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 IRF2BP1Q8IU81 584 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 FAM114A1Q8IWE2 563 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 TTC9BQ8N6N2 239 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 NECAB3Q96P71 396 aaPredicted RBP17.86■□□□□ 0.45
CLK3-207ENST00000562389 CYP3A43Q9HB55 503 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 ABCB6Q9NP58 842 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 CRTAC1Q9NQ79 661 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 ABI2Q9NYB9 513 aaPredicted RBP17.86■□□□□ 0.45
CLK3-207ENST00000562389 GTF3C4Q9UKN8 822 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
CLK3-207ENST00000562389 MYBPHLA2RUH7 354 aa17.85■□□□□ 0.45
CLK3-207ENST00000562389 A8MXQ7 604 aa17.85■□□□□ 0.45
CLK3-207ENST00000562389 LOC730098B7Z3J9 87 aa17.85■□□□□ 0.45
CLK3-207ENST00000562389 AFPP02771 609 aaKnown RBP17.85■□□□□ 0.45
CLK3-207ENST00000562389 PDGFRBP09619 1106 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms