RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 DDX42Q86XP3 938 aaKnown RBP eCLIP13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 ZDHHC14Q8IZN3 488 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 IQCKQ8N0W5 287 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 BEST2Q8NFU1 509 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 ZIM3Q96PE6 472 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 MCEEQ96PE7 176 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 OSMRQ99650 979 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 NEUROG2Q9H2A3 272 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 DPH5Q9H2P9 285 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 DDX56Q9NY93 547 aaKnown RBP13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 ADAM21Q9UKJ8 722 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 KAT6AQ92794 2004 aa13.39□□□□□ -0.27
AC055717.2-201ENST00000561864 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 TCRBV7S2A1N4TA0A589 114 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 SIGLEC16A6NMB1 481 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 O00370 1275 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 MICAL2O94851 1124 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 ECEL1O95672 775 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 ATF7P17544 494 aaPredicted RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 FGFR4P22455 802 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 PTPN7P35236 360 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 CRYBB1P53674 252 aaPredicted RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 TAS2R40P59535 323 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 COPS2P61201 443 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 TMEM62Q0P6H9 643 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 SNX17Q15036 470 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 ZBTB6Q15916 424 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 PTPN20Q4JDL3 420 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 TMC3Q7Z5M5 1100 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 RCOR2Q8IZ40 523 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 FNIP1Q8TF40 1166 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 DNAJB3Q8WWF6 145 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 LENG1Q96BZ8 264 aaPredicted RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 FMO2Q99518 471 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 MIS12Q9H081 205 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 ZDHHC18Q9NUE0 388 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 SNTG2Q9NY99 539 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 FEZ2Q9UHY8 353 aaPredicted RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 UBQLN1Q9UMX0 589 aaKnown RBP13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 TLL2Q9Y6L7 1015 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 CITO14578 2027 aa13.38□□□□□ -0.27
AC055717.2-201ENST00000561864 GOLGA6CA6NDK9 693 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 FAM155AB1AL88 458 aaPredicted RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 DUSP11O75319 330 aaKnown RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 PPFIA2O75334 1257 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 CD4P01730 458 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 GOLGA6DP0CG33 693 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 HSD17B3P37058 310 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 GABRB2P47870 512 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 NDST1P52848 882 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 RPL7AP62424 266 aaKnown RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 PURAQ00577 322 aaKnown RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 ZNF252P-AS1Q0IIN9 211 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 CRHR2Q13324 411 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 KLF1Q13351 362 aaPredicted RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 HIC1Q14526 733 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 ZNF268Q14587 947 aaPredicted RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 TAF2Q6P1X5 1199 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 ZDHHC24Q6UX98 284 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 ZNF771Q7L3S4 317 aaPredicted RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 POLNQ7Z5Q5 900 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 CCDC50Q8IVM0 306 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 IPO4Q8TEX9 1081 aaKnown RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 TWNKQ96RR1 684 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 NT5C1AQ9BXI3 368 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 DCLK3Q9C098 648 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 DNAI2Q9GZS0 605 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 GRHL1Q9NZI5 618 aa13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 MTRF1LQ9UGC7 380 aaKnown RBP13.37□□□□□ -0.27
AC055717.2-201ENST00000561864 M0QYV0 167 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 TREHO43280 583 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 CA12O43570 354 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 CAPN15O75808 1086 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 RECQL4O94761 1208 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 GJB6O95452 261 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 GAS8O95995 478 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 KRT1P04264 644 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 RPLP2P05387 115 aaKnown RBP13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 SETSIPP0DME0 302 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 RALAP11233 206 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 SSR1P43307 286 aaKnown RBP13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 TM4SF4P48230 202 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 FCGRTP55899 365 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 GJA9P57773 515 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 PSMC1P62191 440 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms