RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TRIM71Q2Q1W2 868 aaKnown RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 TSNAXIP1Q2TAA8 658 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 GNASQ5JWF2 1037 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 TAF3Q5VWG9 929 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ACAD10Q6JQN1 1059 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 SLC27A1Q6PCB7 646 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 CXCL17Q6UXB2 119 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 FAM43BQ6ZT52 329 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 SERINC5Q86VE9 423 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 FAM228AQ86W67 206 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 NT5DC4Q86YG4 428 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 CEP112Q8N8E3 955 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 RBBP8NLQ8NC74 664 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 SLC35G2Q8TBE7 412 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 RFFLQ8WZ73 363 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 TAF4BQ92750 862 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ABHD8Q96I13 439 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 SNX27Q96L92 541 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 ZMAT2Q96NC0 199 aaKnown RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 OSBPL9Q96SU4 736 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 MMS19Q96T76 1030 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 NIF3L1Q9GZT8 377 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 THAP2Q9H0W7 228 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 SDCBP2Q9H190 292 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 PLEKHA5Q9HAU0 1116 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 OSGEPQ9NPF4 335 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 POLIQ9UNA4 740 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 DERAQ9Y315 318 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 C2CD2Q9Y426 696 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 PCDHB2Q9Y5E7 798 aa6.98□□□□□ -1.29
CAPN3-210ENST00000561817 V9GYY5 206 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-210ENST00000561817 TMCO5BA8MYB1 307 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CES2O00748 559 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 DDX3YO15523 660 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 BUB1BO60566 1050 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 PHACTR2O75167 634 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ERLIN2O94905 339 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 FTCDO95954 541 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 TNNC2P02585 160 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CHRNA1P02708 482 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 HMGCRP04035 888 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ASGR1P07306 291 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 TMEM191BP0C7N4 346 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 RARBP10826 455 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 GNAT1P11488 350 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 KRT5P13647 590 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ATICP31939 592 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CDH5P33151 784 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 SCN1AP35498 2009 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 GMPRP36959 345 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 USP8P40818 1118 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 PDE6CP51160 858 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 GUCY2FP51841 1108 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CHMP4BP1P59074 171 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 BPIFB4P59827 614 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 NOMO3P69849 1222 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 GPC5P78333 572 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 MRPS6P82932 125 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 TAGLNQ01995 201 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CENPCQ03188 943 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ITIH3Q06033 890 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 MTFR1Q15390 333 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 KCNA10Q16322 511 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 PKN2Q16513 984 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 TAF2Q6P1X5 1199 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 NOTUMQ6P988 496 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CATSPER4Q7RTX7 472 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 LIMS2Q7Z4I7 341 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 NT5DC3Q86UY8 548 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CD302Q8IX05 232 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 C7orf31Q8N865 590 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 NOA1Q8NC60 698 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 MSANTD4Q8NCY6 345 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 SMG8Q8ND04 991 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 WHAMMQ8TF30 809 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 RABGGTAQ92696 567 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 HES6Q96HZ4 224 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ANKRD36BP1Q96IX9 119 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ACAP3Q96P50 834 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ALS2CR12Q96Q35 445 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CELF4Q9BZC1 486 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 OSBPL7Q9BZF2 842 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 SENP6Q9GZR1 1112 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 GOLPH3Q9H4A6 298 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 XPNPEP3Q9NQH7 507 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 AVENQ9NQS1 362 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CISHQ9NSE2 258 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 SNTG2Q9NY99 539 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 CNTN3Q9P232 1028 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 GTF3C4Q9UKN8 822 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 NOC2LQ9Y3T9 749 aaKnown RBP6.97□□□□□ -1.29
CAPN3-210ENST00000561817 HYOU1Q9Y4L1 999 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 PCDHB4Q9Y5E5 795 aa6.97□□□□□ -1.29
CAPN3-210ENST00000561817 ALPK3Q96L96 1907 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 TCRBV5S1A1TA0A578 114 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 PPEF2O14830 753 aa6.96□□□□□ -1.3
CAPN3-210ENST00000561817 KIF4AO95239 1232 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms