RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SGF29Q96ES7 293 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 MKNK1Q9BUB5 465 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 FOXP3Q9BZS1 431 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 TDRD3Q9H7E2 651 aaKnown RBP10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 OSGEPQ9NPF4 335 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 CNTNAP5Q8WYK1 1306 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 PRLRP16471 622 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 FNTAP49354 379 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 PIGHQ14442 188 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SPDYAQ5MJ70 313 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 RIN3Q8TB24 985 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 MASTLQ96GX5 879 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 NLRP1Q9C000 1473 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ZHX2Q9Y6X8 837 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ALBP02768 609 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 BGNP21810 368 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 CALB2P22676 271 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SFNP31947 248 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 PHKA2P46019 1235 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 TBCCQ15814 346 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 FBXO36Q8NEA4 188 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 BBS2Q9BXC9 721 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 TEX12Q9BXU0 123 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 HPS4Q9NQG7 708 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ARHGEF38Q9NXL2 777 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 TLR2O60603 784 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 PON1P27169 355 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 STXBP2Q15833 593 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 C12orf60Q5U649 245 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 BEST2Q8NFU1 509 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 NEDD1Q8NHV4 660 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 LZICQ8WZA0 190 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 YIPF2Q9BWQ6 316 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 MOV10L1Q9BXT6 1211 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SEMA4AQ9H3S1 761 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 TRIM17Q9Y577 477 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 MEI4A8MW99 385 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 USP1O94782 785 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 FAM200BP0CF97 657 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ITGA4P13612 1032 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 EPHB2P29323 1055 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 HMOX2P30519 316 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 TPI1P60174 286 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 KRT72Q14CN4 511 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 TRADDQ15628 312 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SNRNP48Q6IEG0 339 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 TSEN2Q8NCE0 465 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 URGCPQ8TCY9 931 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ARHGAP20Q9P2F6 1191 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 FEM1BQ9UK73 627 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 HPSEQ9Y251 543 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 EFCAB6Q5THR3 1501 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 FKBP9O95302 570 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 RARGP13631 454 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 NFKBIAP25963 317 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 FKBP9P1Q75LS8 142 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 FAM84BQ96KN1 310 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SRPK1Q96SB4 655 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 COA1Q9GZY4 146 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ELP3Q9H9T3 547 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SLC39A10Q9ULF5 831 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 NCAPD2Q15021 1401 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 STRNO43815 780 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SGPL1O95470 568 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 RBP3P10745 1247 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 CYP2B6P20813 491 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 AVPR1AP37288 418 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ELF3P78545 371 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 CACNB2Q08289 660 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 ZNF844Q08AG5 666 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SLC9A5Q14940 896 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 KCTD21Q4G0X4 260 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 NEUROG2Q9H2A3 272 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 PAK5Q9P286 719 aa10.64□□□□□ -0.71
GTF3C1-202ENST00000561623 SPRP35270 261 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 TTMPQ5BVD1 217 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 SLC10A5Q5PT55 438 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 SNX30Q5VWJ9 437 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 ACTRT1Q8TDG2 376 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 CASP10Q92851 521 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 TAGLN3Q9UI15 199 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 TOB1P50616 345 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 IFI35P80217 286 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 NCOA4Q13772 614 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 FUKQ8N0W3 1084 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 RMDN1Q96DB5 314 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 KIF12Q96FN5 646 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 ISCA1Q9BUE6 129 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 A0A0U1RQJ8 604 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 POLRMTO00411 1230 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 TRIM25Q14258 630 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 CCDC142Q17RM4 750 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 AENQ8WTP8 325 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 TMEM143Q96AN5 459 aa10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 GAS2L1Q99501 681 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-202ENST00000561623 PLEKHA5Q9HAU0 1116 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms