RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PI4K2AQ9BTU6 479 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 APOL5Q9BWW9 433 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 VRTNQ9H8Y1 702 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 UBE2TQ9NPD8 197 aaPredicted RBP11.43□□□□□ -0.58
TPM1-229ENST00000561242 SIX4Q9UIU6 781 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
TPM1-229ENST00000561242 ASB3Q9Y575 518 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 CEP83Q9Y592 693 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 PCDHGC5Q9Y5F6 944 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
TPM1-229ENST00000561242 TRIM66O15016 1216 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 SPTLC1O15269 473 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 ZMYND10O75800 440 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 ASS1P00966 412 aaKnown RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 WEE2P0C1S8 567 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 EPCAMP16422 314 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 PTPN2P17706 415 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 PTPN1P18031 435 aaKnown RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 SSTR3P32745 418 aaPredicted RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 BPIFB4P59827 614 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 CAMK1Q14012 370 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 INTS6LQ5JSJ4 861 aaKnown RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 TMC5Q6UXY8 1006 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 PDZD4Q76G19 769 aaPredicted RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 CACNA2D4Q7Z3S7 1137 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 RNF168Q8IYW5 571 aaPredicted RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 LEMD2Q8NC56 503 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 ZNF397Q8NF99 534 aaPredicted RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 SLC35C1Q96A29 364 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 SPAG5Q96R06 1193 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 INTS2Q9H0H0 1204 aaKnown RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 SAMSN1Q9NSI8 373 aaKnown RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 TAB2Q9NYJ8 693 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 UXTQ9UBK9 157 aaPredicted RBP11.42□□□□□ -0.58
TPM1-229ENST00000561242 GTF3C4Q9UKN8 822 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 KIAA1257Q9ULG3 409 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 L1RE1Q9UN81 338 aa11.42□□□□□ -0.58
TPM1-229ENST00000561242 GTPBP10A4D1E9 387 aaKnown RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 PMM2O15305 246 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 MEFVO15553 781 aaPredicted RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 ACAT1P24752 427 aaKnown RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 GBP2P32456 591 aaPredicted RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 WNT7BP56706 349 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 DUSP4Q13115 394 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 SMAD4Q13485 552 aaKnown RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 CUL2Q13617 745 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 MRPL58Q14197 206 aaKnown RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 LEXMQ3ZCV2 418 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 PABPC1LQ4VXU2 614 aaKnown RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 ZNF394Q53GI3 561 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 MDH1BQ5I0G3 518 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 LRSAM1Q6UWE0 723 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 TMEM184AQ6ZMB5 413 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 C15orf39Q6ZRI6 1047 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 C11orf57Q6ZUT1 292 aaPredicted RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 B3GALNT2Q8NCR0 500 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 VN1R2Q8NFZ6 395 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 TMEM176AQ96HP8 235 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 FUBP3Q96I24 572 aaKnown RBP eCLIP11.41□□□□□ -0.58
TPM1-229ENST00000561242 CRACR2AQ9BSW2 395 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 ELOVL4Q9GZR5 314 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 ZCWPW1Q9H0M4 648 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 ADAM7Q9H2U9 754 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 SLITRK6Q9H5Y7 841 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 ASAH2Q9NR71 780 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 HSFX1Q9UBD0 423 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 MAGED2Q9UNF1 606 aaPredicted RBP11.41□□□□□ -0.58
TPM1-229ENST00000561242 SLC27A5Q9Y2P5 690 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 DAAM1Q9Y4D1 1078 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
TPM1-229ENST00000561242 PTPRJQ12913 1337 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 DPYSL4O14531 572 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CCL16O15467 120 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 LILRB3O75022 631 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 OR4Q2P0C623 313 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CSH1P0DML2 217 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CSH2P0DML3 217 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 RFX1P22670 979 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 HOXA9P31269 272 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 GTF2F1P35269 517 aaKnown RBP eCLIP11.4□□□□□ -0.58
TPM1-229ENST00000561242 NDST1P52848 882 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CDH8P55286 799 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 PSMC1P62191 440 aaKnown RBP11.4□□□□□ -0.58
TPM1-229ENST00000561242 PTK2Q05397 1052 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 TWF1Q12792 350 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 RAPGEF1Q13905 1077 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 STILQ15468 1287 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 ARHGAP44Q17R89 818 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CBWD6Q4V339 395 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 SGO2Q562F6 1265 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CBWD3Q5JTY5 395 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 CBWD5Q5RIA9 395 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 SPOPLQ6IQ16 392 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 RNF19BQ6ZMZ0 732 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 OTOP3Q7RTS5 596 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 ACOT1Q86TX2 421 aa11.4□□□□□ -0.58
TPM1-229ENST00000561242 TCEAL8Q8IYN2 117 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms