RNA–Protein interactions for RNA: ENST00000561068.5

RPS17-208, Transcript of ribosomal protein S17, human

TSL 3

Gene RPS17, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS17-208	ENST00000561068	SCARA3	Q6AZY7	606 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	DCLRE1A	Q6PJP8	1040 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	CCDC73	Q6ZRK6	1079 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	EP400NL	Q6ZTU2	488 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	SV2B	Q7L1I2	683 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	SFR1	Q86XK3	245 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	PDILT	Q8N807	584 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	C12orf76	Q8N812	135 aa	Predicted RBP	5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	GLIS3	Q8NEA6	775 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	ZSWIM2	Q8NEG5	633 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	TPCN2	Q8NHX9	752 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	HASPIN	Q8TF76	798 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	HDAC7	Q8WUI4	952 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	PIK3R5	Q8WYR1	880 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	STAM	Q92783	540 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	CASP10	Q92851	521 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	ZNF396	Q96N95	335 aa	Predicted RBP	5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	ACAP3	Q96P50	834 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	C7orf25	Q9BPX7	421 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	PHF7	Q9BWX1	381 aa	Predicted RBP	5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	RHOBTB2	Q9BYZ6	727 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	POMK	Q9H5K3	350 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	PLEKHA5	Q9HAU0	1116 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	BRD7	Q9NPI1	651 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	OLFML3	Q9NRN5	406 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	MRPL17	Q9NRX2	175 aa	Known RBP	5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	SEL1L	Q9UBV2	794 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	CCDC39	Q9UFE4	941 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	CPSF3	Q9UKF6	684 aa	Known RBP	5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	FAM50B	Q9Y247	325 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	ANAPC1	Q9H1A4	1944 aa		5.2	□□□□□ -1.58
RPS17-208	ENST00000561068	LAMA1	P25391	3075 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CFAP54	Q96N23	3096 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	FAM237A	A0A1B0GTK4	181 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	ANO9	A1A5B4	782 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	POLR2D	O15514	142 aa	Known RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	TGM5	O43548	720 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	N4BP1	O75113	896 aa	Known RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	RFPL2	O75678	378 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	B3GAT3	O94766	335 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	FAM13A	O94988	1023 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CLTA	P09496	248 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	WEE2	P0C1S8	567 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	SPATA31D3	P0C874	917 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CXCL8	P10145	99 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	MYB	P10242	640 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	RPL17	P18621	184 aa	Known RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	KLRC2	P26717	231 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CASP1	P29466	404 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	LRPAP1	P30533	357 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	RPL9	P32969	192 aa	Known RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	STAT6	P42226	847 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	BRCC3	P46736	316 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	GLUD2	P49448	558 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	AARS	P49588	968 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	POU5F1	Q01860	360 aa	Known RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	BMS1	Q14692	1282 aa	Known RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	STK38	Q15208	465 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	TPRN	Q4KMQ1	711 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	HERC4	Q5GLZ8	1057 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	FAM171A1	Q5VUB5	890 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	KIAA1841	Q6NSI8	718 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	PRSS55	Q6UWB4	352 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	SPATA31D4	Q6ZUB0	917 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	GPR149	Q86SP6	731 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	PPFIBP1	Q86W92	1011 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	KRTAP1-3	Q8IUG1	177 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CMAS	Q8NFW8	434 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CXorf38	Q8TB03	319 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	KCNG4	Q8TDN1	519 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	LEO1	Q8WVC0	666 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	RIN2	Q8WYP3	895 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	HPS3	Q969F9	1004 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	ZNF707	Q96C28	371 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	HVCN1	Q96D96	273 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	FBXL18	Q96ME1	805 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	UROC1	Q96N76	676 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	TCHP	Q9BT92	498 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	TTPAL	Q9BTX7	342 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CCDC94	Q9BW85	323 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	APOL5	Q9BWW9	433 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	EMILIN2	Q9BXX0	1053 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	TRIM9	Q9C026	710 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	PHACTR1	Q9C0D0	580 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	TNMD	Q9H2S6	317 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	CUEDC2	Q9H467	287 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	PLEKHA4	Q9H4M7	779 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	ZFP64	Q9NPA5	681 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	PANK4	Q9NVE7	773 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	DZANK1	Q9NVP4	752 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	MTRR	Q9UBK8	725 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	HPSE	Q9Y251	543 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	SSX2IP	Q9Y2D8	614 aa		5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	SF3B1	O75533	1304 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
RPS17-208	ENST00000561068	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.18	□□□□□ -1.58
RPS17-208	ENST00000561068	CCDC195	A0A1B0GUA6	201 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms