RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GCLMP48507 274 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 LHX1P48742 406 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 CDR1P51861 262 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 TWF1Q12792 350 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 STIM1Q13586 685 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 WDR72Q3MJ13 1102 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 INTS6LQ5JSJ4 861 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 POTEHQ6S545 545 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 OTOP3Q7RTS5 596 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 GPT2Q8TD30 523 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 NELFBQ8WX92 580 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 GBP4Q96PP9 640 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 MED15Q96RN5 788 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 MRPL45Q9BRJ2 306 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 DNAJC25Q9H1X3 360 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 MUTYHQ9UIF7 546 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 POLIQ9UNA4 740 aa16.37■□□□□ 0.21
SNRPA1-213ENST00000560856 NRG2O14511 850 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 SLC16A3O15427 465 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 LRRN2O75325 713 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 ASS1P00966 412 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 LRG1P02750 347 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 RHOP08100 348 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 EPB41P11171 864 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 KRT13P13646 458 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 GTF2H1P32780 548 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 MYL7Q01449 175 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 SMARCB1Q12824 385 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 SLC5A9Q2M3M2 681 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 KLHL10Q6JEL2 608 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 FAM171BQ6P995 826 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 DCP1BQ8IZD4 617 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 PLCD3Q8N3E9 789 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 TDRD5Q8NAT2 981 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 ITFG1Q8TB96 612 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 TAS1R2Q8TE23 839 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 LRRC3Q9BY71 257 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 SDCBP2Q9H190 292 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 EPS15L1Q9UBC2 864 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 LIMD1Q9UGP4 676 aa16.36■□□□□ 0.21
SNRPA1-213ENST00000560856 MYBPHLA2RUH7 354 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 DCXO43602 365 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 ATP2C2O75185 946 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 SOAT2O75908 522 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 PTPN2P17706 415 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 FSHRP23945 695 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 PCSK1P29120 753 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 CCR2P41597 374 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 EPHA5P54756 1037 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 TSPY1Q01534 308 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 SGSM1Q2NKQ1 1148 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 ZNF699Q32M78 642 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 PABPC1LQ4VXU2 614 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 PRSS36Q5K4E3 855 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 FILIP1Q7Z7B0 1213 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 HS6ST3Q8IZP7 471 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 SPPL2BQ8TCT7 592 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 C2orf15Q8WU43 125 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 ACSF2Q96CM8 615 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 CEP63Q96MT8 703 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 MMS19Q96T76 1030 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 TMEM8AQ9HCN3 771 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 CRTAC1Q9NQ79 661 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 NXF1Q9UBU9 619 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 GTF3C4Q9UKN8 822 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 CTNND2Q9UQB3 1225 aa16.35■□□□□ 0.21
SNRPA1-213ENST00000560856 MOSPD3O75425 235 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 PDGFRBP09619 1106 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 HAPLN1P10915 354 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 LAMP2P13473 410 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 ATF6P18850 670 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 GNL1P36915 607 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 CDH8P55286 799 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 STX17P56962 302 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 TNNC1P63316 161 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 PAK1Q13153 545 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 NFE2Q16621 373 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 ZNF667Q5HYK9 610 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 GET4Q7L5D6 327 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 TAF4BQ92750 862 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 SEMA4DQ92854 862 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 FGF13Q92913 245 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 SLC35C1Q96A29 364 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 TCEAL4Q96EI5 215 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 SYT15Q9BQS2 421 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 CORO1BQ9BR76 489 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 PI4K2AQ9BTU6 479 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 SMYD3Q9H7B4 428 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 APOBEC3GQ9HC16 384 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 C11orf16Q9NQ32 467 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 CDH9Q9ULB4 789 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 CDH7Q9ULB5 785 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 PCDHB5Q9Y5E4 795 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 TECTAO75443 2155 aa16.34■□□□□ 0.21
SNRPA1-213ENST00000560856 ASGR2P07307 311 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 GBP2P32456 591 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 TUFMP49411 452 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms