RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MMS22LQ6ZRQ5 1243 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 ANKRD23Q86SG2 305 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 ZBTB33Q86T24 672 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 SRLQ86TD4 932 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 ZNF410Q86VK4 478 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 RHPN2Q8IUC4 686 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 FBXO16Q8IX29 292 aaPredicted RBP10.28□□□□□ -0.76
RTF1-206ENST00000560447 BCAS4Q8TDM0 211 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 BTBD6Q96KE9 485 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 TSPAN18Q96SJ8 248 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 NCAPGQ9BPX3 1015 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 OSBPL8Q9BZF1 889 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 INO80BQ9C086 356 aaPredicted RBP10.28□□□□□ -0.76
RTF1-206ENST00000560447 MTMR12Q9C0I1 747 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 XYLT2Q9H1B5 865 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 PLEKHA4Q9H4M7 779 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.76
RTF1-206ENST00000560447 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 SMAPO00193 183 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 TULP2O00295 520 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 LGALS2P05162 132 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 PGK2P07205 417 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 HARSP12081 509 aaKnown RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 ATF2P15336 505 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 RDXP35241 583 aaKnown RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 ASPAP45381 313 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 GTF2A2P52657 109 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 LACTBP83111 547 aaPredicted RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 TFAMQ00059 246 aaKnown RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 KRT17Q04695 432 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 ZNF268Q14587 947 aaPredicted RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 AMHR2Q16671 573 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 DCAF4L1Q3SXM0 396 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 TNFAIP8L3Q5GJ75 292 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 KCTD16Q68DU8 428 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 TAPT1Q6NXT6 567 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 ADAT2Q7Z6V5 191 aaKnown RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 ERICH1Q86X53 443 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 LRRC71Q8N4P6 559 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 SH2D3CQ8N5H7 860 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 TTC13Q8NBP0 860 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 AFG1LQ8WV93 481 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 SLC10A4Q96EP9 437 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 SCLT1Q96NL6 688 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 TRIM31Q9BZY9 425 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 FHDC1Q9C0D6 1143 aaPredicted RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 EPB41L4BQ9H329 900 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 PPCSQ9HAB8 311 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 ITGA11Q9UKX5 1188 aa10.27□□□□□ -0.77
RTF1-206ENST00000560447 PDCD11Q14690 1871 aaKnown RBP10.27□□□□□ -0.77
RTF1-206ENST00000560447 TCRBV7S2A1N4TA0A589 114 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 RRN3P2A6NIE6 340 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 SIGLEC16A6NMB1 481 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 NDUFAB1O14561 156 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 RIPK2O43353 540 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 FAM107AO95990 144 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 HMGCRP04035 888 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 KRT7P08729 469 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 ABHD2P08910 425 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 RALAP11233 206 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 VDRP11473 427 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 MARK3P27448 753 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 GABRB2P47870 512 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
RTF1-206ENST00000560447 PDCLQ13371 301 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 HADHQ16836 314 aaKnown RBP10.26□□□□□ -0.77
RTF1-206ENST00000560447 TMEM132AQ24JP5 1023 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 ODF2Q5BJF6 829 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 DCUN1D2Q6PH85 259 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 ZNF365Q70YC5 407 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 TAOK1Q7L7X3 1001 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 EEPD1Q7L9B9 569 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 YTHDF3Q7Z739 585 aaKnown RBP10.26□□□□□ -0.77
RTF1-206ENST00000560447 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 CCDC50Q8IVM0 306 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 RIBC1Q8N443 379 aaPredicted RBP10.26□□□□□ -0.77
RTF1-206ENST00000560447 P3H4Q92791 437 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 NLRP4Q96MN2 994 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 SERPINB12Q96P63 405 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 ADPGKQ9BRR6 497 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 DNAI2Q9GZS0 605 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 PLEKHA5Q9HAU0 1116 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 SLC5A4Q9NY91 659 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 ASIC3Q9UHC3 531 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 RRP15Q9Y3B9 282 aaKnown RBP10.26□□□□□ -0.77
RTF1-206ENST00000560447 NEU2Q9Y3R4 380 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 IVNS1ABPQ9Y6Y0 642 aa10.26□□□□□ -0.77
RTF1-206ENST00000560447 C5orf60A6NFR6 353 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 GLTPD2A6NH11 291 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 RGS16O15492 202 aaPredicted RBP10.25□□□□□ -0.77
RTF1-206ENST00000560447 STAG3L1P0CL83 205 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 SETSIPP0DME0 302 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 INSRRP14616 1297 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 IVDP26440 423 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 GRM5P41594 1212 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 MMP13P45452 471 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 CLCN3P51790 818 aa10.25□□□□□ -0.77
RTF1-206ENST00000560447 CORO7P57737 925 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms