RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ZFP37Q9Y6Q3 630 aaPredicted RBP10.67□□□□□ -0.7
SPG11-212ENST00000558790 NUP210Q8TEM1 1887 aaPredicted RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 A0A1B0GUA9 196 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 LRRIQ4A6NIV6 560 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 ELOA3DA6NLF2 546 aaPredicted RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 SHISA8B8ZZ34 492 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 PTGESO14684 152 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 CCL16O15467 120 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 ADAM12O43184 909 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 USO1O60763 962 aaKnown RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 TADA2AO75478 443 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 CDKL5O76039 1030 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 LYPLA2O95372 231 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 CPB1P15086 417 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 ACPPP15309 386 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 TGM1P22735 817 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 SOX18P35713 384 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 TUSC3Q13454 348 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 SNW1Q13573 536 aaKnown RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 MLF2Q15773 248 aaPredicted RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 ELOA3BQ3SY89 546 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 PPM1JQ5JR12 505 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 PPM1LQ5SGD2 360 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 FAM171A1Q5VUB5 890 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 CDCA2Q69YH5 1023 aaPredicted RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 CEP57Q86XR8 500 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 ELOA3Q8NG57 546 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 ITFG1Q8TB96 612 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 SLC7A14Q8TBB6 771 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 EDARADDQ8WWZ3 215 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 FOXD4L4Q8WXT5 416 aaPredicted RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 FGF13Q92913 245 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 CCDC43Q96MW1 224 aaKnown RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 HSD17B14Q9BPX1 270 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 KXD1Q9BQD3 176 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 TTPALQ9BTX7 342 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 DDX23Q9BUQ8 820 aaKnown RBP10.66□□□□□ -0.7
SPG11-212ENST00000558790 CXCL16Q9H2A7 254 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 LATS2Q9NRM7 1088 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 ANKEF1Q9NU02 776 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 TENM4Q6N022 2769 aa10.66□□□□□ -0.7
SPG11-212ENST00000558790 KANSL1LA0AUZ9 987 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 OIP5O43482 229 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 KINO60870 393 aaKnown RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 RECQL4O94761 1208 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 BAG4O95429 457 aaKnown RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 NEFLP07196 543 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 HNRNPA1P09651 372 aaKnown RBP eCLIP10.65□□□□□ -0.7
SPG11-212ENST00000558790 XBP1P17861 261 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 HOXA9P31269 272 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 TAGLNQ01995 201 aaKnown RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 HYAL2Q12891 473 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 UBXN2BQ14CS0 331 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 NAB2Q15742 525 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 ZNF385CQ66K41 422 aaPredicted RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 MTSS1LQ765P7 747 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 FAM35AQ86V20 835 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 LNX1Q8TBB1 728 aaPredicted RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 PIGOQ8TEQ8 1089 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 SHDQ96IW2 340 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 TM6SF1Q9BZW5 370 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 PDZD7Q9H5P4 517 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 PARD6AQ9NPB6 346 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 PDRG1Q9NUG6 133 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 PRMT7Q9NVM4 692 aaPredicted RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 SPATA6Q9NWH7 488 aaPredicted RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 HCFC1R1Q9NWW0 138 aa10.65□□□□□ -0.7
SPG11-212ENST00000558790 MTF2Q9Y483 593 aaPredicted RBP10.65□□□□□ -0.7
SPG11-212ENST00000558790 TSC2P49815 1807 aa10.65□□□□□ -0.71
SPG11-212ENST00000558790 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 FREM2Q5SZK8 3169 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 A0A087WWV3 80 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 WIPF1O43516 503 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 CTDNEP1O95476 244 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 EDN1P05305 212 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 KRT2P35908 639 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 ENOX2Q16206 610 aaKnown RBP10.64□□□□□ -0.71
SPG11-212ENST00000558790 CALCRLQ16602 461 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 MAEAQ7L5Y9 396 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 ING5Q8WYH8 240 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 BSNDQ8WZ55 320 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 RTKNQ9BST9 563 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 BCO2Q9BYV7 579 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 TTC12Q9H892 705 aaPredicted RBP10.64□□□□□ -0.71
SPG11-212ENST00000558790 SNTG2Q9NY99 539 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 TPCN1Q9ULQ1 816 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 PCDHA12Q9UN75 941 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 ZNF638Q14966 1978 aaKnown RBP10.64□□□□□ -0.71
SPG11-212ENST00000558790 DENND4CQ5VZ89 1909 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 SDK1Q7Z5N4 2213 aa10.64□□□□□ -0.71
SPG11-212ENST00000558790 TCHHQ07283 1943 aa10.63□□□□□ -0.71
SPG11-212ENST00000558790 N4BP3O15049 544 aa10.63□□□□□ -0.71
SPG11-212ENST00000558790 EPB41L2O43491 1005 aaKnown RBP10.63□□□□□ -0.71
SPG11-212ENST00000558790 LAMTOR5O43504 91 aa10.63□□□□□ -0.71
SPG11-212ENST00000558790 NEMFO60524 1076 aa10.63□□□□□ -0.71
SPG11-212ENST00000558790 PFKFB2O60825 505 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms