RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 EDN1P05305 212 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 TYMPP19971 482 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 CYP3A5P20815 502 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 MUTP22033 750 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 PAX3P23760 479 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 DDX6P26196 483 aaKnown RBP eCLIP5.64□□□□□ -1.51
SPG11-208ENST00000558155 RPA1P27694 616 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 AVPR1AP37288 418 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 PI4KAP42356 2102 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 DPP6P42658 865 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 DHPSP49366 369 aaPredicted RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 BFSP1Q12934 665 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 NR1H3Q13133 447 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 PSMD2Q13200 908 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 HNRNPDQ14103 355 aaKnown RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 TOB2Q14106 344 aaPredicted RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 DMC1Q14565 340 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 VEPH1Q14D04 833 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 PDGFRLQ15198 375 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 EARS2Q5JPH6 523 aaKnown RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 STXBP5Q5T5C0 1151 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 KIAA1211LQ6NV74 962 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 DSTYKQ6XUX3 929 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 CYP2U1Q7Z449 544 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 CMTM8Q8IZV2 173 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 CEP120Q8N960 986 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 ATAD1Q8NBU5 361 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 RPLP0P6Q8NHW5 317 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 PIGKQ92643 395 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 ACDQ96AP0 544 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 C18orf25Q96B23 403 aaPredicted RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 MTMR9Q96QG7 549 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 MKNK1Q9BUB5 465 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 SLC46A2Q9BY10 475 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 CDT1Q9H211 546 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 EBF3Q9H4W6 596 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 PLEKHA5Q9HAU0 1116 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 POLD4Q9HCU8 107 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 PTPRHQ9HD43 1115 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 CNTN3Q9P232 1028 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 TSR3Q9UJK0 312 aaKnown RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 TIMM13Q9Y5L4 95 aaPredicted RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 NUP210Q8TEM1 1887 aaPredicted RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 ADAMTS20P59510 1910 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 MTMR11A4FU01 709 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 FAM221BA6H8Z2 402 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 UPK3BL1B0FP48 263 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 UPK3BL2E5RIL1 263 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 XPOTO43592 962 aaKnown RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 HYAL3O43820 417 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 ALDH1A2O94788 518 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 VNN2O95498 520 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 OR4Q2P0C623 313 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 LRPAP1P30533 357 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 GJA4P35212 333 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 ATXN3P54252 364 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 PEX3P56589 373 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 SIM1P81133 766 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 SMARCB1Q12824 385 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 NR5A1Q13285 461 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 DMP1Q13316 513 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 BYSLQ13895 437 aaKnown RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 SLC10A6Q3KNW5 377 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 SOWAHCQ53LP3 525 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 TRIM61Q5EBN2 209 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 PMS2CLQ68D20 193 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 OVOS1Q6IE37 1185 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 MPZL3Q6UWV2 235 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 HDDC3Q8N4P3 179 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 CPA6Q8N4T0 437 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 TSTD1Q8NFU3 115 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 CD101Q93033 1021 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 TSPAN18Q96SJ8 248 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 KIFC3Q9BVG8 833 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 TARS2Q9BW92 718 aaKnown RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 TM6SF1Q9BZW5 370 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 CRISPLD1Q9H336 500 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 KIF9Q9HAQ2 790 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 FBRSL1Q9HCM7 1045 aaKnown RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 HPS4Q9NQG7 708 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 KMT5AQ9NQR1 393 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 GJB4Q9NTQ9 266 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 PDRG1Q9NUG6 133 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 TDP1Q9NUW8 608 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 POLR3BQ9NW08 1133 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 ORC3Q9UBD5 711 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 EVLQ9UI08 416 aaPredicted RBP5.63□□□□□ -1.51
SPG11-208ENST00000558155 TBX20Q9UMR3 447 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 INVSQ9Y283 1065 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 STK36Q9NRP7 1315 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 GON4LQ3T8J9 2241 aa5.63□□□□□ -1.51
SPG11-208ENST00000558155 SPAARA0A1B0GVQ0 90 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 OTOL1A6NHN0 477 aaPredicted RBP5.62□□□□□ -1.51
SPG11-208ENST00000558155 BTBD18B2RXH4 712 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 PATE3B3GLJ2 98 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 C3orf80F5H4A9 247 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 TNFRSF10BO14763 440 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 CLDN3O15551 220 aa5.62□□□□□ -1.51
SPG11-208ENST00000558155 EPB41L2O43491 1005 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms