RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 EPSTI1Q96J88 318 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 PYM1Q9BRP8 204 aaKnown RBP17.23■□□□□ 0.35
SCFD1-224ENST00000557713 C2orf42Q9NWW7 574 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 USP18Q9UMW8 372 aa17.23■□□□□ 0.35
SCFD1-224ENST00000557713 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
SCFD1-224ENST00000557713 ANK1P16157 1881 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
SCFD1-224ENST00000557713 KPNA7A9QM74 516 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 PPP1R37O75864 691 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 RETP07949 1114 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 CDC25CP30307 473 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 CNR2P34972 360 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 PLCB2Q00722 1185 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 TNK2Q07912 1038 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 SPEM2Q0P670 501 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 CCINQ13939 588 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 VEPH1Q14D04 833 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 PON2Q15165 354 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 TMEM150AQ86TG1 271 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 LONP2Q86WA8 852 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 SYNPOQ8N3V7 929 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 KRI1Q8N9T8 703 aaKnown RBP17.22■□□□□ 0.35
SCFD1-224ENST00000557713 SPPL2BQ8TCT7 592 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 GIPC2Q8TF65 315 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 HVCN1Q96D96 273 aa17.22■□□□□ 0.35
SCFD1-224ENST00000557713 SCN1AP35498 2009 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 F11P03951 625 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 HMGA1P17096 107 aaKnown RBP17.21■□□□□ 0.35
SCFD1-224ENST00000557713 SIM2Q14190 667 aaPredicted RBP17.21■□□□□ 0.35
SCFD1-224ENST00000557713 POSTNQ15063 836 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 PTPAQ15257 358 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 SV2CQ496J9 727 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 PRR23BQ6ZRT6 265 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 SFR1Q86XK3 245 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 NT5DC4Q86YG4 428 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 DCP1BQ8IZD4 617 aaKnown RBP17.21■□□□□ 0.35
SCFD1-224ENST00000557713 POMGNT1Q8WZA1 660 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 RTKNQ9BST9 563 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 SMG9Q9H0W8 520 aaKnown RBP17.21■□□□□ 0.35
SCFD1-224ENST00000557713 THG1LQ9NWX6 298 aaKnown RBP17.21■□□□□ 0.35
SCFD1-224ENST00000557713 ZMYM5Q9UJ78 669 aa17.21■□□□□ 0.35
SCFD1-224ENST00000557713 CDV3Q9UKY7 258 aaKnown RBP17.21■□□□□ 0.35
SCFD1-224ENST00000557713 LRP3O75074 770 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 IL18RAPO95256 599 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 HOXA6P31267 233 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 HOXC13P31276 330 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 KCNA1Q09470 495 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 SRSF5Q13243 272 aaKnown RBP17.2■□□□□ 0.34
SCFD1-224ENST00000557713 ITPRIPL2Q3MIP1 535 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 CMTM8Q8IZV2 173 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 DNAJC19Q96DA6 116 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 GCNAQ96QF7 691 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 FAM83CQ9BQN1 747 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 GKN1Q9NS71 199 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 TMLHEQ9NVH6 421 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 CLIC4Q9Y696 253 aa17.2■□□□□ 0.34
SCFD1-224ENST00000557713 DCDC2BA2VCK2 349 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 MYMKA6NI61 221 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 SOBPA7XYQ1 873 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 WNT7BP56706 349 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 NLRP12P59046 1061 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 TAF12Q16514 161 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 ZSWIM2Q8NEG5 633 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 ABI2Q9NYB9 513 aaPredicted RBP17.19■□□□□ 0.34
SCFD1-224ENST00000557713 SEL1LQ9UBV2 794 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 STK17AQ9UEE5 414 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 CCDC39Q9UFE4 941 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
SCFD1-224ENST00000557713 PCDHB5Q9Y5E4 795 aa17.19■□□□□ 0.34
SCFD1-224ENST00000557713 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
SCFD1-224ENST00000557713 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.19■□□□□ 0.34
SCFD1-224ENST00000557713 NCOR2Q9Y618 2525 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 PNPLA4P41247 253 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 CSRP2Q16527 193 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 L1TD1Q5T7N2 865 aaKnown RBP17.18■□□□□ 0.34
SCFD1-224ENST00000557713 HEATR6Q6AI08 1181 aaKnown RBP17.18■□□□□ 0.34
SCFD1-224ENST00000557713 SCARA3Q6AZY7 606 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 WDR5BQ86VZ2 330 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 CXorf38Q8TB03 319 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 USP13Q92995 863 aaPredicted RBP17.18■□□□□ 0.34
SCFD1-224ENST00000557713 CHFRQ96EP1 664 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 ZNF560Q96MR9 790 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 ACCSQ96QU6 501 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 FAM213AQ9BRX8 229 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 MRPL44Q9H9J2 332 aaKnown RBP17.18■□□□□ 0.34
SCFD1-224ENST00000557713 HPS4Q9NQG7 708 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 SEMA4GQ9NTN9 838 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 EXOC7Q9UPT5 735 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 CCL26Q9Y258 94 aa17.18■□□□□ 0.34
SCFD1-224ENST00000557713 OTOL1A6NHN0 477 aaPredicted RBP17.17■□□□□ 0.34
SCFD1-224ENST00000557713 GAP43P17677 238 aa17.17■□□□□ 0.34
SCFD1-224ENST00000557713 DDX6P26196 483 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCFD1-224ENST00000557713 AVPR1AP37288 418 aa17.17■□□□□ 0.34
SCFD1-224ENST00000557713 GPR15P49685 360 aa17.17■□□□□ 0.34
SCFD1-224ENST00000557713 TSPY1Q01534 308 aa17.17■□□□□ 0.34
SCFD1-224ENST00000557713 CUL4AQ13619 759 aa17.17■□□□□ 0.34
SCFD1-224ENST00000557713 RUNX3Q13761 415 aa17.17■□□□□ 0.34
SCFD1-224ENST00000557713 NFE2Q16621 373 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms