RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CDR1P51861 262 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 PSMC1P62191 440 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 TSPY1Q01534 308 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 TFF2Q03403 129 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 LRMPQ12912 555 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 GPR17Q13304 367 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 IQCB1Q15051 598 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 KRT31Q15323 416 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 VWA3BQ502W6 1294 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 WDR44Q5JSH3 913 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 TPGS2Q68CL5 300 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 LRRTM3Q86VH5 581 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 C12orf76Q8N812 135 aaPredicted RBP15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 OR6B3Q8NGW1 331 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 HDAC7Q8WUI4 952 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 PKMYT1Q99640 499 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 ARID3AQ99856 593 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 SYT15Q9BQS2 421 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 ACBD6Q9BR61 282 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 APOL5Q9BWW9 433 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 SNX25Q9H3E2 840 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 PLEKHA4Q9H4M7 779 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 SFXN1Q9H9B4 322 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 TMLHEQ9NVH6 421 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 GCNT4Q9P109 453 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 HMGXB4Q9UGU5 601 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 AFF4Q9UHB7 1163 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 REV3LO60673 3130 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 ATP2C2O75185 946 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 RFPL2O75678 378 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 SEC24AO95486 1093 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 C8AP07357 584 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 PDGFRBP09619 1106 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 ATF2P15336 505 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 ADCY1Q08828 1119 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 CETN1Q12798 172 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 SLC39A12Q504Y0 691 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 RARS2Q5T160 578 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 LIN9Q5TKA1 542 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 TTC9BQ8N6N2 239 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 SLC7A14Q8TBB6 771 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 INTS2Q9H0H0 1204 aaKnown RBP15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 CRISPLD1Q9H336 500 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 NDST4Q9H3R1 872 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 DPEP3Q9H4B8 488 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 CYP3A43Q9HB55 503 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 CBX8Q9HC52 389 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 CRTAC1Q9NQ79 661 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 CD207Q9UJ71 328 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 CDH9Q9ULB4 789 aa15.87■□□□□ 0.13
VIPAS39-210ENST00000557466 SMTNL1A8MU46 457 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 A8MXQ7 604 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 ZMYND10O75800 440 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 ATP1A3P13637 1013 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 HOXB8P17481 243 aaPredicted RBP15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 GNL1P36915 607 aaPredicted RBP15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 INCA1Q0VD86 236 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 CUL2Q13617 745 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 LEXMQ3ZCV2 418 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 ELMSAN1Q6PJG2 1045 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 ARHGEF19Q8IW93 802 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 TCEAL8Q8IYN2 117 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 DCP1BQ8IZD4 617 aaKnown RBP15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 ATAD1Q8NBU5 361 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 SMRP1Q8NCR6 262 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 EHBP1Q8NDI1 1231 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 FAXDC2Q96IV6 333 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 NT5C1BQ96P26 610 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 CRACR2AQ9BSW2 395 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 S1PR5Q9H228 398 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 CYP4F11Q9HBI6 524 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 DPP7Q9UHL4 492 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 CDH22Q9UJ99 828 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 GTF3C4Q9UKN8 822 aa15.86■□□□□ 0.13
VIPAS39-210ENST00000557466 MYBPHLA2RUH7 354 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 GTPBP10A4D1E9 387 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 GRXCR2A6NFK2 248 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 PRRG1O14668 218 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 CD58P19256 250 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 ELF1P32519 619 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 NDST1P52848 882 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 COPB1P53618 953 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 ORC1Q13415 861 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 SMAD4Q13485 552 aaKnown RBP15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 PPM1LQ5SGD2 360 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 LRSAM1Q6UWE0 723 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 TMC5Q6UXY8 1006 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 GBP6Q6ZN66 633 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 CCDC149Q6ZUS6 474 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 LUZP1Q86V48 1076 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 CMASQ8NFW8 434 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 MYLPFQ96A32 169 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 ZNF707Q96C28 371 aaPredicted RBP15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 TWNKQ96RR1 684 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 LPIN3Q9BQK8 851 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 VPS16Q9H269 839 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 ZDHHC7Q9NXF8 308 aa15.85■□□□□ 0.13
VIPAS39-210ENST00000557466 ABI2Q9NYB9 513 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms