RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 GPR37O15354 613 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 SLC16A3O15427 465 aaKnown RBP10.37□□□□□ -0.75
SRP54-210ENST00000556380 RFPL2O75678 378 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 ZMYND10O75800 440 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 KRT19P08727 400 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 FAM163BP0C2L3 166 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 ATF2P15336 505 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 MYL6P60660 151 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 ITIH3Q06033 890 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 BFSP1Q12934 665 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 STIM1Q13586 685 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 SOWAHAQ2M3V2 549 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 RARS2Q5T160 578 aaKnown RBP10.37□□□□□ -0.75
SRP54-210ENST00000556380 TPGS2Q68CL5 300 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 KLHL10Q6JEL2 608 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 DPH6Q7L8W6 267 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 FILIP1Q7Z7B0 1213 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 USP37Q86T82 979 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 LRRTM3Q86VH5 581 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 OSTM1Q86WC4 334 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 TOP6BLQ8N6T0 577 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 MLKLQ8NB16 471 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 OR10T2Q8NGX3 314 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 TSG101Q99816 390 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 APOL5Q9BWW9 433 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 SFXN1Q9H9B4 322 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 AFF4Q9UHB7 1163 aaKnown RBP10.37□□□□□ -0.75
SRP54-210ENST00000556380 DPP7Q9UHL4 492 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 DSEQ9UL01 958 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 MAFFQ9ULX9 164 aa10.37□□□□□ -0.75
SRP54-210ENST00000556380 CCDC195A0A1B0GUA6 201 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 HUS1O60921 280 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 SEC24AO95486 1093 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 POU2F2P09086 479 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 OR4Q2P0C623 313 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 ATICP31939 592 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 GTF2H1P32780 548 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 MYO1EQ12965 1108 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 PAK1Q13153 545 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 GPR17Q13304 367 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 NCOA4Q13772 614 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 TMC5Q6UXY8 1006 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 CYP26C1Q6V0L0 522 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 FRMD5Q7Z6J6 570 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 TCEAL8Q8IYN2 117 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 TMEM86AQ8N2M4 240 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 SPATA18Q8TC71 538 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 KBTBD7Q8WVZ9 684 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 NECAB3Q96P71 396 aaPredicted RBP10.36□□□□□ -0.75
SRP54-210ENST00000556380 TMEM209Q96SK2 561 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 PKMYT1Q99640 499 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 ZCWPW1Q9H0M4 648 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 CRISPLD1Q9H336 500 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 ZDHHC7Q9NXF8 308 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 PRKAG3Q9UGI9 489 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 RWDD2AQ9UIY3 292 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 CTNND2Q9UQB3 1225 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 FAM50BQ9Y247 325 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 NME7Q9Y5B8 376 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 SNX9Q9Y5X1 595 aa10.36□□□□□ -0.75
SRP54-210ENST00000556380 TRIOO75962 3097 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 BICDL2A1A5D9 508 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 TACC1O75410 805 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 MBD3O95983 291 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 HLA-DRAP01903 254 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 C8AP07357 584 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 HNRNPA1P09651 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
SRP54-210ENST00000556380 WEE2P0C1S8 567 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 EPB41P11171 864 aaKnown RBP10.35□□□□□ -0.75
SRP54-210ENST00000556380 KRT13P13646 458 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 HOXA9P31269 272 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 MTHFRP42898 656 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 GCLMP48507 274 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 ARPP19P56211 112 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 STX17P56962 302 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 NLRP12P59046 1061 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 ZP2Q05996 745 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 TRPC3Q13507 836 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 DPCR1Q3MIW9 517 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 WDR72Q3MJ13 1102 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 ATAT1Q5SQI0 421 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 CES5AQ6NT32 575 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 RNF19BQ6ZMZ0 732 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 METTL23Q86XA0 190 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 IRF2BP1Q8IU81 584 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 SLC35C1Q96A29 364 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 NECTIN4Q96NY8 510 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 ACBD6Q9BR61 282 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 COL25A1Q9BXS0 654 aaPredicted RBP10.35□□□□□ -0.75
SRP54-210ENST00000556380 TMEM8AQ9HCN3 771 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 CD320Q9NPF0 282 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 TMLHEQ9NVH6 421 aa10.35□□□□□ -0.75
SRP54-210ENST00000556380 ARMCX3Q9UH62 379 aaPredicted RBP10.35□□□□□ -0.75
SRP54-210ENST00000556380 PLXNA3P51805 1871 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms