RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 STAT5BP51692 787 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 CRYBB1P53674 252 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-239ENST00000556315 ATXN1P54253 815 aaKnown RBP5.49□□□□□ -1.53
ATXN3-239ENST00000556315 RNF4P78317 190 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 ARHGAP8P85298 464 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 NMIQ13287 307 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-239ENST00000556315 PLCB4Q15147 1175 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 NONOQ15233 471 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-239ENST00000556315 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 GAB4Q2WGN9 574 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 BBS9Q3SYG4 887 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 USP17L6PQ6QN14 398 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 MTHFD1LQ6UB35 978 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 UNC5AQ6ZN44 842 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 CCDC149Q6ZUS6 474 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 GPR149Q86SP6 731 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 ZNF589Q86UQ0 364 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-239ENST00000556315 CABP7Q86V35 215 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 PPFIBP1Q86W92 1011 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 C1orf210Q8IVY1 113 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 KIAA0319LQ8IZA0 1049 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 SLC39A11Q8N1S5 342 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 LRRC43Q8N309 656 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 FAM169BQ8N8A8 192 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 SLC22A17Q8WUG5 538 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 RNF141Q8WVD5 230 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 CASD1Q96PB1 797 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 PCYT2Q99447 389 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 ASPNQ9BXN1 380 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 DUSP15Q9H1R2 295 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-239ENST00000556315 JADE2Q9NQC1 790 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 GINS2Q9Y248 185 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 IRAK3Q9Y616 596 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 SPTBN4Q9H254 2564 aa5.49□□□□□ -1.53
ATXN3-239ENST00000556315 PLXNA3P51805 1871 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 A0A1W2PQH9 124 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 MEIS2O14770 477 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 CYTH3O43739 400 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 HBP1O60381 514 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 KINO60870 393 aaKnown RBP5.48□□□□□ -1.53
ATXN3-239ENST00000556315 TMEM253P0C7T8 217 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SRFP11831 508 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 EPCAMP16422 314 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 ZSCAN20P17040 1043 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-239ENST00000556315 GLDCP23378 1020 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 CA8P35219 290 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SLC26A2P50443 739 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 POLGP54098 1239 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-239ENST00000556315 PDE1AP54750 535 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 MTMR1Q13613 665 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 GRM4Q14833 912 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SEC23AQ15436 765 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 IMMTQ16891 758 aaKnown RBP5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SLC35G1Q2M3R5 365 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 LETM2Q2VYF4 491 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 C20orf194Q5TEA3 1177 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 ANKRD45Q5TZF3 282 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 TMC5Q6UXY8 1006 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 ANKS3Q6ZW76 656 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 VPS52Q8N1B4 723 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SLC44A3Q8N4M1 653 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SUMF1Q8NBK3 374 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 TRAPPC12Q8WVT3 735 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 RIN2Q8WYP3 895 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SECISBP2LQ93073 1101 aaKnown RBP5.48□□□□□ -1.53
ATXN3-239ENST00000556315 TMEM169Q96HH4 297 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 KREMEN1Q96MU8 473 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SLC6A18Q96N87 628 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 ADAMTS10Q9H324 1103 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 EPB41L4BQ9H329 900 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SP110Q9HB58 689 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SLC9A2Q9UBY0 812 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 UBIAD1Q9Y5Z9 338 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 GVINP1Q7Z2Y8 2422 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 TTC3P53804 2025 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
ATXN3-239ENST00000556315 KMT2EQ8IZD2 1858 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 TRIOO75962 3097 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 WASH4PA8MWX3 477 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 NT5C1B-RDH14C9J2C7 533 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 NPIPB6E9PJ23 425 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 NARSO43776 548 aaKnown RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 DCNP07585 359 aaKnown RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 CTSAP10619 480 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 SDSP20132 328 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 SMARCA1P28370 1054 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 PBX3P40426 434 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 PMS1P54277 932 aaKnown RBP5.47□□□□□ -1.53
ATXN3-239ENST00000556315 BCAR1P56945 870 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 ACTR2P61160 394 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 TROAPQ12815 778 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 FXNQ16595 210 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 ZNF528Q3MIS6 628 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 ZNF484Q5JVG2 852 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 SPECC1Q5M775 1068 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 LILRA6Q6PI73 481 aa5.47□□□□□ -1.53
ATXN3-239ENST00000556315 CYP26C1Q6V0L0 522 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms