RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TNNC2P02585 160 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 CDC25CP30307 473 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 HOXD13P35453 343 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 WNT7BP56706 349 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 KRT85P78386 507 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 MYL7Q01449 175 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 SNW1Q13573 536 aaKnown RBP13.56□□□□□ -0.24
SNX6-207ENST00000556303 PKP1Q13835 747 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 MGAT5BQ3V5L5 792 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 POTEHQ6S545 545 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 MFSD6LQ8IWD5 586 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 SHKBP1Q8TBC3 707 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 MSANTD3Q96H12 275 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 SEMA4AQ9H3S1 761 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 AGPAT3Q9NRZ7 376 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 OBP2AQ9NY56 170 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 SIX4Q9UIU6 781 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 FRYLO94915 3013 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 TCHHQ07283 1943 aa13.56□□□□□ -0.24
SNX6-207ENST00000556303 A0A1W2PRU2 124 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 GABRDO14764 452 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 TGFB1I1O43294 461 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 KRT19P08727 400 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 HAPLN1P10915 354 aaPredicted RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 PCSK1P29120 753 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 TEAD2Q15562 447 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 SNRNP35Q16560 246 aaKnown RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 FOXD4L6Q3SYB3 417 aaPredicted RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 ARHGAP15Q53QZ3 475 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 FOXD4L3Q6VB84 417 aaPredicted RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 LIMS2Q7Z4I7 341 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 LRRTM3Q86VH5 581 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 C1orf210Q8IVY1 113 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 XXYLT1Q8NBI6 393 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 GLIS3Q8NEA6 775 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 ZSCAN18Q8TBC5 510 aaPredicted RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 HPS3Q969F9 1004 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNX6-207ENST00000556303 CEP295NLQ96MC4 621 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 ZSWIM3Q96MP5 696 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 PHOX2BQ99453 314 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 BCO2Q9BYV7 579 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 PLA2G2FQ9BZM2 168 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 MTMR12Q9C0I1 747 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 SCAND2PQ9GZW5 306 aaPredicted RBP13.55□□□□□ -0.24
SNX6-207ENST00000556303 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 BRD9Q9H8M2 597 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 ZNF292O60281 2723 aa13.55□□□□□ -0.24
SNX6-207ENST00000556303 EP300Q09472 2414 aaPredicted RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 FAM237AA0A1B0GTK4 181 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 CHADO15335 359 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 CSH1P0DML2 217 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 CSH2P0DML3 217 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 DDX6P26196 483 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNX6-207ENST00000556303 RPS9P46781 194 aaKnown RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 CUL4BQ13620 913 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 PSMD6Q15008 389 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 TAF12Q16514 161 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 INTS6LQ5JSJ4 861 aaKnown RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 VITQ6UXI7 678 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 GAREM2Q75VX8 874 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 ST13P5Q8NFI4 369 aaPredicted RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 NOC3LQ8WTT2 800 aaKnown RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 CLDN23Q96B33 292 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 SPATA32Q96LK8 384 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 GCNAQ96QF7 691 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 ATXN3LQ9H3M9 355 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 TASP1Q9H6P5 420 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 ZNF334Q9HCZ1 680 aaPredicted RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 LTB4R2Q9NPC1 389 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 DDX43Q9NXZ2 648 aaKnown RBP13.54□□□□□ -0.24
SNX6-207ENST00000556303 SNX9Q9Y5X1 595 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 TSC2P49815 1807 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 GVINP1Q7Z2Y8 2422 aa13.54□□□□□ -0.24
SNX6-207ENST00000556303 FAM170BA6NMN3 283 aa13.53□□□□□ -0.24
SNX6-207ENST00000556303 HEPACAM2A8MVW5 462 aa13.53□□□□□ -0.24
SNX6-207ENST00000556303 ZNF263O14978 683 aa13.53□□□□□ -0.24
SNX6-207ENST00000556303 ACTN4O43707 911 aaKnown RBP13.53□□□□□ -0.24
SNX6-207ENST00000556303 STAU1O95793 577 aaKnown RBP13.53□□□□□ -0.24
SNX6-207ENST00000556303 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
SNX6-207ENST00000556303 ATF6P18850 670 aa13.53□□□□□ -0.24
SNX6-207ENST00000556303 GABRR2P28476 465 aa13.53□□□□□ -0.24
SNX6-207ENST00000556303 AFMP43652 599 aa13.53□□□□□ -0.24
SNX6-207ENST00000556303 AP3M2P53677 418 aa13.53□□□□□ -0.24
SNX6-207ENST00000556303 RPL10AP62906 217 aaKnown RBP13.53□□□□□ -0.24
SNX6-207ENST00000556303 CYP24A1Q07973 514 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms