RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 PRR16Q569H4 304 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 ATAT1Q5SQI0 421 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 CES5AQ6NT32 575 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 THAP5Q7Z6K1 395 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 DDX53Q86TM3 631 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 REXO1Q8N1G1 1221 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 SLC5A5Q92911 643 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 MAP7D2Q96T17 732 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 APOL5Q9BWW9 433 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 CARS2Q9HA77 564 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 DACT1Q9NYF0 836 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 CDH22Q9UJ99 828 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 AKT3Q9Y243 479 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 PCDHB14Q9Y5E9 798 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 CYP3A7-CYP3A51PA0A087WV96 503 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 NT5C1B-RDH14C9J2C7 533 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 MSH4O15457 936 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 OFD1O75665 1012 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 PSMD10O75832 226 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 GALTP07902 379 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 CTSAP10619 480 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 CYP3A7P24462 503 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 NBL1P41271 181 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 CLCN5P51795 746 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 EVCP57679 992 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 FANCCQ00597 558 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 DRP2Q13474 957 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 GIT2Q14161 759 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 KRT32Q14532 448 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 BMP2KLQ5H9B9 411 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 TRMT1LQ7Z2T5 733 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 VPS52Q8N1B4 723 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 C12orf76Q8N812 135 aaPredicted RBP10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 TMEM105Q8N8V8 129 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 BAHD1Q8TBE0 780 aaPredicted RBP10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 PIWIL2Q8TC59 973 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 CCDC12Q8WUD4 166 aaPredicted RBP10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 IGSF21Q96ID5 467 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 MRPL9Q9BYD2 267 aaKnown RBP10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 KRTAP9-2Q9BYQ4 174 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 AGXT2Q9BYV1 514 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 ZBP1Q9H171 429 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 FAM86C1Q9NVL1 165 aa10.04□□□□□ -0.8
GTF2A1-204ENST00000556268 FAM186AA6NE01 2351 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 SPTBN4Q9H254 2564 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 CSDE1O75534 798 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 FGFR4P22455 802 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 SFNP31947 248 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 METAP2P50579 478 aaKnown RBP eCLIP10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 UGCGQ16739 394 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 XKR3Q5GH77 459 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 KIAA1841Q6NSI8 718 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 MRPL10Q7Z7H8 261 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 TMEM173Q86WV6 379 aaPredicted RBP10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 PHACTR4Q8IZ21 702 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 BICD2Q8TD16 824 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 UBE2FQ969M7 185 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 ZNF668Q96K58 619 aaPredicted RBP10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 MBOAT7Q96N66 472 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 GCOM2Q9BZD3 368 aaPredicted RBP10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 NRDE2Q9H7Z3 1164 aa10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 MYH9P35579 1960 aaKnown RBP10.03□□□□□ -0.8
GTF2A1-204ENST00000556268 NID2Q14112 1375 aa10.02□□□□□ -0.8
GTF2A1-204ENST00000556268 KMT2EQ8IZD2 1858 aa10.02□□□□□ -0.8
GTF2A1-204ENST00000556268 MAFO75444 373 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 RECKO95980 971 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 EPCAMP16422 314 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 JAK3P52333 1124 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 PRKCEQ02156 737 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 Q4G0T1 1027 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 SEZ6Q53EL9 994 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 ASCL5Q7RTU5 278 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 GPR149Q86SP6 731 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 ATG4DQ86TL0 474 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 DTWD2Q8NBA8 298 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 RNF169Q8NCN4 708 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 RNF141Q8WVD5 230 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 TMEM169Q96HH4 297 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 CCDC136Q96JN2 1154 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 CCDC74BQ96LY2 380 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 YTHDC1Q96MU7 727 aaKnown RBP10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 VN1R3Q9BXE9 311 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 RNF26Q9BY78 433 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 RHOBTB2Q9BYZ6 727 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 INO80BQ9C086 356 aaPredicted RBP10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 UNC45AQ9H3U1 944 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 SMOC2Q9H3U7 446 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 SH3GLB2Q9NR46 395 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 CYP26B1Q9NR63 512 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 TBC1D13Q9NVG8 400 aa10.02□□□□□ -0.81
GTF2A1-204ENST00000556268 A0A087WZ62 844 aa10.01□□□□□ -0.81
GTF2A1-204ENST00000556268 MEIS3P2A8K0S8 358 aa10.01□□□□□ -0.81
GTF2A1-204ENST00000556268 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.01□□□□□ -0.81
GTF2A1-204ENST00000556268 BIN1O00499 593 aa10.01□□□□□ -0.81
GTF2A1-204ENST00000556268 GAS7O60861 476 aa10.01□□□□□ -0.81
GTF2A1-204ENST00000556268 ATE1O95260 518 aa10.01□□□□□ -0.81
GTF2A1-204ENST00000556268 EFEMP2O95967 443 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms