RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 LONP2Q86WA8 852 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CD302Q8IX05 232 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CXorf38Q8TB03 319 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 RAD54LQ92698 747 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SECISBP2LQ93073 1101 aaKnown RBP15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ST6GALNAC4Q9H4F1 302 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SEMA4GQ9NTN9 838 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GMEB2Q9UKD1 530 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CCL26Q9Y258 94 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 C2CD2Q9Y426 696 aa15.54■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CFAP47Q6ZTR5 3102 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SLC30A4O14863 429 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 EXTL3O43909 919 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FAM13AO94988 1023 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 F11P03951 625 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 KPNA1P52294 538 aaPredicted RBP15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 KCNA1Q09470 495 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SIM2Q14190 667 aaPredicted RBP15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 LRRC32Q14392 662 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 DGKKQ5KSL6 1271 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 HEATR6Q6AI08 1181 aaKnown RBP15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 C1orf228Q6PIY5 440 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PRR23BQ6ZRT6 265 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 YAF2Q8IY57 180 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 STKLD1Q8NE28 680 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 BPIFB1Q8TDL5 484 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CDK5RAP3Q96JB5 506 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FAM84AQ96KN4 292 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SEPT5Q99719 369 aaPredicted RBP15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ASB7Q9H672 318 aa15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FBRSL1Q9HCM7 1045 aaKnown RBP15.53■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FRYQ5TBA9 3013 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CYB561D2O14569 222 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TADA3O75528 432 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 KRT37O76014 449 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ADRB1P08588 477 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 HAPLN1P10915 354 aaPredicted RBP15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SCP2P22307 547 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PAX3P23760 479 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PPP2R5DQ14738 602 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 RABEP1Q15276 862 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CSRP2Q16527 193 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CCDC142Q17RM4 750 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TMEM196Q5HYL7 178 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 NAIF1Q69YI7 327 aaPredicted RBP15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FSTL4Q6MZW2 842 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ARMCX5Q6P1M9 558 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PRR23CQ6ZRP0 262 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ITIH5Q86UX2 942 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FAM160A2Q8N612 972 aaPredicted RBP15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 GIPC2Q8TF65 315 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 USP13Q92995 863 aaPredicted RBP15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PKMYT1Q99640 499 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 DPP3Q9NY33 737 aa15.52■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PTPRDP23468 1912 aa15.52■□□□□ 0.07
CHMP4BP1-201ENST00000556017 HELZP42694 1942 aaKnown RBP15.52■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CHD6Q8TD26 2715 aa15.52■□□□□ 0.07
CHMP4BP1-201ENST00000556017 FGF19O95750 216 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CNR2P34972 360 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 UBA7P41226 1012 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TUFMP49411 452 aaKnown RBP15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 GPR15P49685 360 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TAF6P49848 677 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 NLRP12P59046 1061 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 MGAT5BQ3V5L5 792 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TRIM68Q6AZZ1 485 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ADALQ6DHV7 355 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ZNF720Q7Z2F6 126 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 WDR5BQ86VZ2 330 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CMTM8Q8IZV2 173 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 NETO1Q8TDF5 533 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 LARP4BQ92615 738 aaKnown RBP15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 EZH1Q92800 747 aaPredicted RBP15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 DNAJC19Q96DA6 116 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 EPSTI1Q96J88 318 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 GKN1Q9NS71 199 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 RXFP3Q9NSD7 469 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 AGO2Q9UKV8 859 aaKnown RBP15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 RAB23Q9ULC3 237 aa15.51■□□□□ 0.07
CHMP4BP1-201ENST00000556017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 TM4SF5O14894 197 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CDC25CP30307 473 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 DDIT3P35638 169 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 LONP1P36776 959 aaKnown RBP15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PXNP49023 591 aaPredicted RBP15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 MCM2P49736 904 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PLCB2Q00722 1185 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 POU5F1Q01860 360 aaKnown RBP15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 PTPAQ15257 358 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ITPRIPL2Q3MIP1 535 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 ARHGAP15Q53QZ3 475 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SFR1Q86XK3 245 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SYNPOQ8N3V7 929 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 SPPL2BQ8TCT7 592 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 CALML4Q96GE6 196 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 FGFBP2Q9BYJ0 223 aa15.5■□□□□ 0.07
CHMP4BP1-201ENST00000556017 DSEQ9UL01 958 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms