RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-222	ENST00000555617	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.53	□□□□□ -0.4
ABCD4-222	ENST00000555617	ARHGAP9	Q9BRR9	750 aa		12.53	□□□□□ -0.4
ABCD4-222	ENST00000555617	ATXN3L	Q9H3M9	355 aa		12.53	□□□□□ -0.4
ABCD4-222	ENST00000555617	SNX11	Q9Y5W9	270 aa		12.53	□□□□□ -0.4
ABCD4-222	ENST00000555617	KIF26B	Q2KJY2	2108 aa		12.53	□□□□□ -0.4
ABCD4-222	ENST00000555617	PPFIA2	O75334	1257 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	DXO	O77932	396 aa	Known RBP	12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	WEE1	P30291	646 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	CASR	P41180	1078 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	ELAVL2	Q12926	359 aa	Known RBP	12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	CLCA4	Q14CN2	919 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	KIF19	Q2TAC6	998 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	LAYN	Q6UX15	382 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	RNF19B	Q6ZMZ0	732 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	MFSD6	Q6ZSS7	791 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	ANKS3	Q6ZW76	656 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	TRMT2A	Q8IZ69	625 aa	Known RBP	12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	DNASE2B	Q8WZ79	361 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	FRAT1	Q92837	279 aa	Predicted RBP	12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	MIB2	Q96AX9	1013 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	SLC25A18	Q9H1K4	315 aa		12.52	□□□□□ -0.41
ABCD4-222	ENST00000555617	TSPAN1	O60635	241 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	GABRR2	P28476	465 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	OXCT1	P55809	520 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	GABRE	P78334	506 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	INSM1	Q01101	510 aa	Predicted RBP	12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	SRSF11	Q05519	484 aa	Known RBP	12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	CLN3	Q13286	438 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	KCNT1	Q5JUK3	1230 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	SIRT2	Q8IXJ6	389 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	C1orf216	Q8TAB5	229 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	MIR1-1HG	Q9H1L0	117 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	SLC6A17	Q9H1V8	727 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	TASP1	Q9H6P5	420 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	FBXL5	Q9UKA1	691 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	CLCA2	Q9UQC9	943 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	PHLPP2	Q6ZVD8	1323 aa		12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	COL27A1	Q8IZC6	1860 aa	Predicted RBP	12.51	□□□□□ -0.41
ABCD4-222	ENST00000555617	NUMA1	Q14980	2115 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617		A0A1W2PNU3	283 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617		H0Y8X5	98 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	MEIS1	O00470	390 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	STBD1	O95210	358 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	RLBP1	P12271	317 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	AMPD2	Q01433	879 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	MTERF2	Q49AM1	385 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	CEP55	Q53EZ4	464 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	GATAD2A	Q86YP4	633 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	ESR2	Q92731	530 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	FAM167A	Q96KS9	214 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	IL21	Q9HBE4	155 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	ECHDC1	Q9NTX5	307 aa		12.5	□□□□□ -0.41
ABCD4-222	ENST00000555617	PCDHGA12	O60330	932 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	SOAT2	O75908	522 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	KIR2DL1	P43626	348 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	CSNK1E	P49674	416 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	ERVPABLB-1	P60509	514 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	MRPS21	P82921	87 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	TRAF1	Q13077	416 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	SUZ12	Q15022	739 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	ZSCAN23	Q3MJ62	389 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	IL27RA	Q6UWB1	636 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	XKR5	Q6UX68	686 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	MAMDC2	Q7Z304	686 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	TTC9B	Q8N6N2	239 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	CNDP2	Q96KP4	475 aa	Known RBP	12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	DOCK9	Q9BZ29	2069 aa		12.49	□□□□□ -0.41
ABCD4-222	ENST00000555617	BCAT2	O15382	392 aa	Predicted RBP	12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	CD97	P48960	835 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	CDR1	P51861	262 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	TBR1	Q16650	682 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	WDR45B	Q5MNZ6	344 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	SYCP2L	Q5T4T6	812 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	SGMS1	Q86VZ5	419 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	CPA6	Q8N4T0	437 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	RFFL	Q8WZ73	363 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	MOCOS	Q96EN8	888 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	KDM4C	Q9H3R0	1056 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	SENP2	Q9HC62	589 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	CD248	Q9HCU0	757 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	PARP2	Q9UGN5	583 aa		12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	AFF4	Q9UHB7	1163 aa	Known RBP	12.48	□□□□□ -0.41
ABCD4-222	ENST00000555617	RTTN	Q86VV8	2226 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	PMS2P1	A4D2B8	440 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	FAM86B1	E9PN63	330 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	IPO5	O00410	1097 aa	Known RBP	12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	MTSS1	O43312	755 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	LUC7L3	O95232	432 aa	Known RBP	12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	PSAP	P07602	524 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	FAM86B2	P0C5J1	330 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	CDC42EP1	Q00587	391 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	MRPL58	Q14197	206 aa	Known RBP	12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	EML3	Q32P44	896 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	TPGS2	Q68CL5	300 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	IQCA1	Q86XH1	822 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	CMTM8	Q8IZV2	173 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	PSTPIP2	Q9H939	334 aa		12.47	□□□□□ -0.41
ABCD4-222	ENST00000555617	GOLGA2P5	Q9HBQ8	144 aa		12.47	□□□□□ -0.41

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