RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 GRSF1Q12849 480 aaKnown RBP eCLIP16.73■□□□□ 0.27
NEDD1-207ENST00000555114 BFSP1Q12934 665 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 CCINQ13939 588 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 PPM1JQ5JR12 505 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
NEDD1-207ENST00000555114 RAD54LQ92698 747 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 ZNF560Q96MR9 790 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 LRRC3BQ96PB8 259 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 KIF2CQ99661 725 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 KIF9Q9HAQ2 790 aa16.73■□□□□ 0.27
NEDD1-207ENST00000555114 NUP210Q8TEM1 1887 aaPredicted RBP16.72■□□□□ 0.27
NEDD1-207ENST00000555114 ATF6P18850 670 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 GJB2P29033 226 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 LONP1P36776 959 aaKnown RBP16.72■□□□□ 0.27
NEDD1-207ENST00000555114 ACOT2P49753 483 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 TSPY1Q01534 308 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 SRSF5Q13243 272 aaKnown RBP16.72■□□□□ 0.27
NEDD1-207ENST00000555114 MCM6Q14566 821 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 SV2CQ496J9 727 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 IL31Q6EBC2 164 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 CC2D1AQ6P1N0 951 aaPredicted RBP16.72■□□□□ 0.27
NEDD1-207ENST00000555114 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 CMTM8Q8IZV2 173 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 GIPC2Q8TF65 315 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 DPP3Q9NY33 737 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 ABI2Q9NYB9 513 aaPredicted RBP16.72■□□□□ 0.27
NEDD1-207ENST00000555114 AGO2Q9UKV8 859 aaKnown RBP16.72■□□□□ 0.27
NEDD1-207ENST00000555114 SLC8A2Q9UPR5 921 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 PCDHB5Q9Y5E4 795 aa16.72■□□□□ 0.27
NEDD1-207ENST00000555114 CCDC163A0A0D9SF12 145 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 SOBPA7XYQ1 873 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 IL18RAPO95256 599 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 HAPLN1P10915 354 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-207ENST00000555114 PLCG1P19174 1290 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 NMT1P30419 496 aaKnown RBP16.71■□□□□ 0.27
NEDD1-207ENST00000555114 PNPLA4P41247 253 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 TNK2Q07912 1038 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 POSTNQ15063 836 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-207ENST00000555114 SLC39A4Q6P5W5 647 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 FAM160A2Q8N612 972 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-207ENST00000555114 C12orf50Q8NA57 414 aaPredicted RBP16.71■□□□□ 0.27
NEDD1-207ENST00000555114 LARP4BQ92615 738 aaKnown RBP16.71■□□□□ 0.27
NEDD1-207ENST00000555114 MRPS31Q92665 395 aaKnown RBP16.71■□□□□ 0.27
NEDD1-207ENST00000555114 HVCN1Q96D96 273 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 LOXL4Q96JB6 756 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 SLC46A2Q9BY10 475 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 CCSER1Q9C0I3 900 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 ST6GALNAC4Q9H4F1 302 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 IL21Q9HBE4 155 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 GKN1Q9NS71 199 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
NEDD1-207ENST00000555114 KPNA7A9QM74 516 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 CSH1P0DML2 217 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 CSH2P0DML3 217 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 CCDC192P0DO97 292 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 RUNX3Q13761 415 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 KARSQ15046 597 aaKnown RBP16.7■□□□□ 0.26
NEDD1-207ENST00000555114 NFE2Q16621 373 aaPredicted RBP16.7■□□□□ 0.26
NEDD1-207ENST00000555114 WSCD1Q658N2 575 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 GAB3Q8WWW8 586 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 POMGNT1Q8WZA1 660 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 SMG9Q9H0W8 520 aaKnown RBP16.7■□□□□ 0.26
NEDD1-207ENST00000555114 UXTQ9UBK9 157 aaPredicted RBP16.7■□□□□ 0.26
NEDD1-207ENST00000555114 EXOC7Q9UPT5 735 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 SMC3Q9UQE7 1217 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 STYXL1Q9Y6J8 313 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 SPTBN2O15020 2390 aa16.7■□□□□ 0.26
NEDD1-207ENST00000555114 TPRP12270 2363 aaKnown RBP16.69■□□□□ 0.26
NEDD1-207ENST00000555114 ANKRD63C9JTQ0 380 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 TULP1O00294 542 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-207ENST00000555114 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
NEDD1-207ENST00000555114 KCNA4P22459 653 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 TMEM196Q5HYL7 178 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 WDR44Q5JSH3 913 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 TMX3Q96JJ7 454 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 FAM83CQ9BQN1 747 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 TDP1Q9NUW8 608 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-207ENST00000555114 CACNA1BQ00975 2339 aa16.69■□□□□ 0.26
NEDD1-207ENST00000555114 TSC2P49815 1807 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 TRDMT1O14717 391 aaKnown RBP16.68■□□□□ 0.26
NEDD1-207ENST00000555114 AXIN1O15169 862 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 EXTL3O43909 919 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
NEDD1-207ENST00000555114 AKAP3O75969 853 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 DDIT3P35638 169 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 LIMK1P53667 647 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 NLRP12P59046 1061 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 RPL10AP62906 217 aaKnown RBP16.68■□□□□ 0.26
NEDD1-207ENST00000555114 PDGFRLQ15198 375 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 FBXO43Q4G163 708 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 ZC2HC1CQ53FD0 456 aaPredicted RBP16.68■□□□□ 0.26
NEDD1-207ENST00000555114 LARP1BQ659C4 914 aaKnown RBP16.68■□□□□ 0.26
NEDD1-207ENST00000555114 LRRTM3Q86VH5 581 aa16.68■□□□□ 0.26
NEDD1-207ENST00000555114 CAMKK1Q8N5S9 505 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms