RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 MED10Q9BTT4 135 aa12.89□□□□□ -0.35
ACTN1-214ENST00000555075 CYP3A43Q9HB55 503 aa12.89□□□□□ -0.35
ACTN1-214ENST00000555075 ABI2Q9NYB9 513 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-214ENST00000555075 CDH9Q9ULB4 789 aa12.89□□□□□ -0.35
ACTN1-214ENST00000555075 MAFFQ9ULX9 164 aa12.89□□□□□ -0.35
ACTN1-214ENST00000555075 PCDHB5Q9Y5E4 795 aa12.89□□□□□ -0.35
ACTN1-214ENST00000555075 PDCD11Q14690 1871 aaKnown RBP12.89□□□□□ -0.35
ACTN1-214ENST00000555075 CCDC195A0A1B0GUA6 201 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 ADAM12O43184 909 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 TACC1O75410 805 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 HNRNPA1P09651 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 TBXAS1P24557 533 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 MTHFRP42898 656 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 RAP1GAPP47736 663 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 TUFMP49411 452 aaKnown RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 EPHB3P54753 998 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 MARSP56192 900 aaKnown RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 GPR17Q13304 367 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 CTC1Q2NKJ3 1217 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 UVSSAQ2YD98 709 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 MGAT5BQ3V5L5 792 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 CBWD6Q4V339 395 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 TCP11X2Q5H9J9 407 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 CBWD3Q5JTY5 395 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 CBWD5Q5RIA9 395 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 C1orf220Q5T0J3 134 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 IQCEQ6IPM2 695 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 C12orf76Q8N812 135 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 CXorf38Q8TB03 319 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 C2orf15Q8WU43 125 aaKnown RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 MRPL45Q9BRJ2 306 aaKnown RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 ZCWPW1Q9H0M4 648 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 XYLT2Q9H1B5 865 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 SAMSN1Q9NSI8 373 aaKnown RBP12.88□□□□□ -0.35
ACTN1-214ENST00000555075 FANCLQ9NW38 375 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 FBXW11Q9UKB1 542 aa12.88□□□□□ -0.35
ACTN1-214ENST00000555075 PRRC2BQ5JSZ5 2229 aaKnown RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 WDR27A2RRH5 827 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 TBX10O75333 385 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 ZMYND10O75800 440 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 GLP2RO95838 553 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 WEE2P0C1S8 567 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 ATF2P15336 505 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 ANXA13P27216 316 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 CDH8P55286 799 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 PSMC1P62191 440 aaKnown RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 SMAD4Q13485 552 aaKnown RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 LEXMQ3ZCV2 418 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 RSPO2Q6UXX9 243 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 TMEM184AQ6ZMB5 413 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 RNF19BQ6ZMZ0 732 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 C15orf39Q6ZRI6 1047 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 RTL10Q7L3V2 364 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 PPM1KQ8N3J5 372 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 EHBP1Q8NDI1 1231 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 VN1R2Q8NFZ6 395 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 FAM81BQ96LP2 452 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 ZNF512Q96ME7 567 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-214ENST00000555075 NDST4Q9H3R1 872 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 TAB2Q9NYJ8 693 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 ANK1P16157 1881 aa12.87□□□□□ -0.35
ACTN1-214ENST00000555075 CCL16O15467 120 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 ABLIM3O94929 683 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 BMP1P13497 986 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 RPL10AP62906 217 aaKnown RBP12.86□□□□□ -0.35
ACTN1-214ENST00000555075 DLX2Q07687 328 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-214ENST00000555075 DUSP4Q13115 394 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 CUL2Q13617 745 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 EXOC3L4Q17RC7 722 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 ITIH5Q86UX2 942 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 UNC93AQ86WB7 457 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 OSTM1Q86WC4 334 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 SCN4BQ8IWT1 228 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 SEMA4DQ92854 862 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 FAXDC2Q96IV6 333 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 TMEM209Q96SK2 561 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 BPIFA3Q9BQP9 254 aa12.86□□□□□ -0.35
ACTN1-214ENST00000555075 CRACR2AQ9BSW2 395 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms