RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GABBR2O75899 941 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 MICAL2O94851 1124 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 RPLP2P05387 115 aaKnown RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 SLC1A1P43005 524 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 PTK7Q13308 1070 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ORC1Q13415 861 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 CNGA2Q16280 664 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ZNF394Q53GI3 561 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ANKS1BQ7Z6G8 1248 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 C12orf50Q8NA57 414 aaPredicted RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 AGO3Q9H9G7 860 aaKnown RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 OGFRQ9NZT2 677 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ADAM22Q9P0K1 906 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 STIM2Q9P246 746 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ANAPC7Q9UJX3 599 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 UBQLN1Q9UMX0 589 aaKnown RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 MEIS3P2A8K0S8 358 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 CCDC188H7C350 402 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 CEP104O60308 925 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 GJB6O95452 261 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ERBB2P04626 1255 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 CALB1P05937 261 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 VDRP11473 427 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ATF7P17544 494 aaPredicted RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 VEGFBP49765 207 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 NDST1P52848 882 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 TAS2R40P59535 323 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 RPL7AP62424 266 aaKnown RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 CCDC181Q5TID7 509 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 LCLAT1Q6UWP7 414 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 CNPY4Q8N129 248 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ARFGAP1Q8N6T3 406 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 FEZF2Q8TBJ5 459 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 MCRS1Q96EZ8 462 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 CPXM1Q96SM3 734 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 SELENOOQ9BVL4 669 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 ARGLU1Q9NWB6 273 aaPredicted RBP9.45□□□□□ -0.9
TDP1-210ENST00000554976 ST3GAL5Q9UNP4 418 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 SCINQ9Y6U3 715 aa9.45□□□□□ -0.9
TDP1-210ENST00000554976 LTBP2Q14767 1821 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 FGFR1P11362 822 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 CAPN2P17655 700 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 IGFBP6P24592 240 aaPredicted RBP9.44□□□□□ -0.9
TDP1-210ENST00000554976 PTGIRP43119 386 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 DNA2P51530 1060 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 KLF1Q13351 362 aaPredicted RBP9.44□□□□□ -0.9
TDP1-210ENST00000554976 GLRA4Q5JXX5 417 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 FBXO47Q5MNV8 452 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 BEST2Q8NFU1 509 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 PARVAQ9NVD7 372 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 SAGE1Q9NXZ1 904 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 CALCOCO1Q9P1Z2 691 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 TCRBV7S2A1N4TA0A589 114 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 ZSCAN5CA6NGD5 496 aaPredicted RBP9.44□□□□□ -0.9
TDP1-210ENST00000554976 MED7O43513 233 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 PSTPIP1O43586 416 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 FGGP02679 453 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 ACLYP53396 1101 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 YARSP54577 528 aaKnown RBP9.44□□□□□ -0.9
TDP1-210ENST00000554976 SLC7A5Q01650 507 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 ZNF211Q13398 564 aaPredicted RBP9.44□□□□□ -0.9
TDP1-210ENST00000554976 LPIN1Q14693 890 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 DAB2IPQ5VWQ8 1189 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 ARHGAP17Q68EM7 881 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 TMCO3Q6UWJ1 677 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 TTC39CQ8N584 583 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 EIF1ADQ8N9N8 165 aaKnown RBP9.44□□□□□ -0.9
TDP1-210ENST00000554976 TMEM35BQ8NCS4 154 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 KRT12Q99456 494 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 TSEN34Q9BSV6 310 aaKnown RBP9.44□□□□□ -0.9
TDP1-210ENST00000554976 SLITRK6Q9H5Y7 841 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 GINS2Q9Y248 185 aa9.44□□□□□ -0.9
TDP1-210ENST00000554976 FSCN2O14926 492 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 TCF4P15884 667 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 AARSP49588 968 aaKnown RBP eCLIP9.43□□□□□ -0.9
TDP1-210ENST00000554976 FAM193AP78312 1265 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 MRPS25P82663 173 aaKnown RBP9.43□□□□□ -0.9
TDP1-210ENST00000554976 PTGISQ16647 500 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 LIN9Q5TKA1 542 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 TRNP1Q6NT89 227 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 TTC27Q6P3X3 843 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 CD300LGQ6UXG3 332 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 AGMOQ6ZNB7 445 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 KATNAL2Q8IYT4 538 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 PRELID2Q8N945 189 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 CASKIN2Q8WXE0 1202 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 CAVIN3Q969G5 261 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 AP1M1Q9BXS5 423 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 MRPL47Q9HD33 250 aaKnown RBP9.43□□□□□ -0.9
TDP1-210ENST00000554976 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 RNF19AQ9NV58 838 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.43□□□□□ -0.9
TDP1-210ENST00000554976 MIOSQ9NXC5 875 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 SQORQ9Y6N5 450 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 PLXNA3P51805 1871 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 DNAH12Q6ZR08 3092 aa9.43□□□□□ -0.9
TDP1-210ENST00000554976 C3orf70A6NLC5 250 aaPredicted RBP9.43□□□□□ -0.9
TDP1-210ENST00000554976 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms