RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 USTQ9Y2C2 406 aa13.84□□□□□ -0.19
MTHFD1-208ENST00000554739 INSL5Q9Y5Q6 135 aa13.84□□□□□ -0.19
MTHFD1-208ENST00000554739 PLXNA3P51805 1871 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 TNFRSF10AO00220 468 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 STX10O60499 249 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 GNL1P36915 607 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 CDR1P51861 262 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 TNNC1P63316 161 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 NTHL1P78549 312 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 TSPY1Q01534 308 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 SMARCB1Q12824 385 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 ZNF667Q5HYK9 610 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 KRT39Q6A163 491 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 DCP1BQ8IZD4 617 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 C2orf15Q8WU43 125 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 SLC35C1Q96A29 364 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 SRRTQ9BXP5 876 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 MMRN2Q9H8L6 949 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 METTL14Q9HCE5 456 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 HCFC1R1Q9NWW0 138 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 CEP72Q9P209 647 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 DNMT3BQ9UBC3 853 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 POLIQ9UNA4 740 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 TCF20Q9UGU0 1960 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 TRIOO75962 3097 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 CLUHO75153 1309 aa13.83□□□□□ -0.2
MTHFD1-208ENST00000554739 MYBPHLA2RUH7 354 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 C2CD4DB7Z1M9 353 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 N4BP1O75113 896 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 ATP2C2O75185 946 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 LRRN2O75325 713 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 MBD3O95983 291 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 LRG1P02750 347 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 PDGFRBP09619 1106 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 PTPN2P17706 415 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 SP100P23497 879 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 PCSK1P29120 753 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 CDH8P55286 799 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 NLRP12P59046 1061 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 TWF1Q12792 350 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 NFE2Q16621 373 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 DPCR1Q3MIW9 517 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 INTS6LQ5JSJ4 861 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 FAM171BQ6P995 826 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 RBM43Q6ZSC3 357 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 TTC9BQ8N6N2 239 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 SNX25Q9H3E2 840 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 SMYD3Q9H7B4 428 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 GTF3C4Q9UKN8 822 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 CDH9Q9ULB4 789 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 YIPF1Q9Y548 306 aa13.82□□□□□ -0.2
MTHFD1-208ENST00000554739 SOAT2O75908 522 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 GNA14O95837 355 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 FSHRP23945 695 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 PIK3CAP42336 1068 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 TUFMP49411 452 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 MXI1P50539 228 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 MARSP56192 900 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 CCDC142Q17RM4 750 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 DCAF17Q5H9S7 520 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 TCERG1LQ5VWI1 586 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 ZDHHC14Q8IZN3 488 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 FBXL13Q8NEE6 735 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 OR6B3Q8NGW1 331 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 SPPL2BQ8TCT7 592 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 ACSF2Q96CM8 615 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 ZNF512Q96ME7 567 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 SDCBP2Q9H190 292 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 DNAJC25Q9H1X3 360 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 CRTAC1Q9NQ79 661 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 AVENQ9NQS1 362 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 RAB20Q9NX57 234 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 COQ4Q9Y3A0 265 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 PCDHB5Q9Y5E4 795 aa13.81□□□□□ -0.2
MTHFD1-208ENST00000554739 RHOP08100 348 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 HAPLN1P10915 354 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 P4HA1P13674 534 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 ASPAP45381 313 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 RAP1GAPP47736 663 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 ALDH1A3P47895 512 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 EPHB3P54753 998 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 PLD1Q13393 1074 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
MTHFD1-208ENST00000554739 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms