RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LAMA2P24043 3122 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 MYH4Q9Y623 1939 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 A0A0C4DFX4 3053 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ARVCFO00192 962 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 GOLIM4O00461 696 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 MPHOSPH10O00566 681 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 WDR46O15213 610 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ARHGAP6O43182 974 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 STRNO43815 780 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 MBD4O95243 580 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 NDUFB10O96000 172 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ARP10275 920 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 RARBP10826 455 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CYP2C9P11712 490 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 FCER1AP12319 257 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 AKR1A1P14550 325 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 PTPN1P18031 435 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 STAT3P40763 770 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ICA1Q05084 483 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 DPTQ07507 201 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ACVR2BQ13705 512 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 GNL2Q13823 731 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 NFYCQ13952 458 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 WDR72Q3MJ13 1102 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CCDC144BQ3MJ40 725 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 MUM1L1Q5H9M0 696 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CCDC158Q5M9N0 1113 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 AKNAD1Q5T1N1 836 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 SLC9C2Q5TAH2 1124 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 YOD1Q5VVQ6 348 aaPredicted RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 TAPT1Q6NXT6 567 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CXCL17Q6UXB2 119 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 TMEM179Q6ZVK1 233 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ARMCX2Q7L311 632 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 AACSQ86V21 672 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CCAR1Q8IX12 1150 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ZNF808Q8N4W9 903 aaPredicted RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 FAM133AQ8N9E0 248 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CACTINQ8WUQ7 758 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ATXN2LQ8WWM7 1075 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CFHR4Q92496 578 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 PLEKHG4BQ96PX9 1271 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CEP89Q96ST8 783 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ALG1Q9BT22 464 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 C12orf65Q9H3J6 166 aaKnown RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 BOLA2Q9H3K6 86 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 MROH8Q9H579 483 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 CABP5Q9NP86 173 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 IL23AQ9NPF7 189 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 RIC8BQ9NVN3 520 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 HOXC10Q9NYD6 342 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ARHGAP28Q9P2N2 729 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 THEGQ9P2T0 379 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 ZHX1Q9UKY1 873 aaPredicted RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 SRPK3Q9UPE1 567 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 TRAF6Q9Y4K3 522 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 REV3LO60673 3130 aa3.78□□□□□ -1.8
SLIRP-202ENST00000553981 TRIP12Q14669 1992 aaPredicted RBP3.78□□□□□ -1.8
SLIRP-202ENST00000553981 MYH7P12883 1935 aa3.78□□□□□ -1.81
SLIRP-202ENST00000553981 SCN10AQ9Y5Y9 1956 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 TRAV20A0A0B4J274 112 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 GSG1L2A8MUP6 293 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 F5H6K3 240 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 M0R2C6 588 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 DUSP11O75319 330 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 PRDM1O75626 825 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 C6orf222P0C671 652 aaPredicted RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 IL9P15248 144 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 POU3F3P20264 500 aaPredicted RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 ACRV1P26436 265 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 RPS19P39019 145 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 IL13RA1P78552 427 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 MRPS5P82675 430 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 TAP1Q03518 808 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 KLRC3Q07444 240 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 IFRD2Q12894 506 aaPredicted RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 FOXL1Q12952 345 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 TSHZ3Q63HK5 1081 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 SNRNP48Q6IEG0 339 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 ARHGAP36Q6ZRI8 547 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 CCDC129Q6ZRS4 1044 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 ANKS3Q6ZW76 656 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 LARP4Q71RC2 724 aaKnown RBP eCLIP3.77□□□□□ -1.812e-8■■□□□ 12.5
SLIRP-202ENST00000553981 RNF180Q86T96 592 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 FBXO16Q8IX29 292 aaPredicted RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 NLGN4XQ8N0W4 816 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 CPXCR1Q8N123 301 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 SEC62Q99442 399 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 SLC38A10Q9HBR0 1119 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 ALG13Q9NP73 1137 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 A1CFQ9NQ94 594 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 TRMT13Q9NUP7 481 aaKnown RBP3.77□□□□□ -1.81
SLIRP-202ENST00000553981 NRBP1Q9UHY1 535 aa3.77□□□□□ -1.81
SLIRP-202ENST00000553981 ELP1O95163 1332 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 A0A0U1RQG5 324 aaPredicted RBP3.76□□□□□ -1.81
SLIRP-202ENST00000553981 MAN2B1O00754 1011 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 ATP2A1O14983 1001 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 ERC2O15083 957 aa3.76□□□□□ -1.81
SLIRP-202ENST00000553981 KLF4O43474 513 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms