RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SPATA5Q8NB90 893 aa7□□□□□ -1.29
ATXN3-223ENST00000553686 PPP2R3CQ969Q6 453 aa7□□□□□ -1.29
ATXN3-223ENST00000553686 C17orf80Q9BSJ5 609 aa7□□□□□ -1.29
ATXN3-223ENST00000553686 CELF4Q9BZC1 486 aaKnown RBP7□□□□□ -1.29
ATXN3-223ENST00000553686 INVSQ9Y283 1065 aa7□□□□□ -1.29
ATXN3-223ENST00000553686 TECTAO75443 2155 aa7□□□□□ -1.29
ATXN3-223ENST00000553686 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
ATXN3-223ENST00000553686 MYH3P11055 1940 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 EP300Q09472 2414 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 A0A1W2PRG0 241 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 VWA5AO00534 786 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 PPP1R12AO14974 1030 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 WDR46O15213 610 aaKnown RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 ADCY6O43306 1168 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 NPTXRO95502 500 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 EYA4O95677 639 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 IL18BPO95998 194 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 KNG1P01042 644 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 CHGBP05060 677 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 CELA3BP08861 270 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 ADORA1P30542 326 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 RFX5P48382 616 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 DEFB103AP81534 67 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 SEC23AQ15436 765 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 PTPN21Q16825 1174 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 FNDC3BQ53EP0 1204 aaKnown RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 GORABQ5T7V8 394 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 ARMCX2Q7L311 632 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 TMCO2Q7Z6W1 182 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 ANKRD35Q8N283 1001 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 AFAP1L1Q8TED9 768 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 TACO1Q9BSH4 297 aaKnown RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 BDH2Q9BUT1 245 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 PHF7Q9BWX1 381 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 TEX13BQ9BXU2 312 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 LMAN2LQ9H0V9 348 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 HMG20BQ9P0W2 317 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 ARHGAP28Q9P2N2 729 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 FBXO40Q9UH90 709 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 CTDP1Q9Y5B0 961 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-223ENST00000553686 PTPRFP10586 1907 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 PHIPQ8WWQ0 1821 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 NCANO14594 1321 aa6.99□□□□□ -1.29
ATXN3-223ENST00000553686 A0A0G2JMZ2 1700 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 PRAMEF25A6NGN4 478 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 ASB14A6NK59 587 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 SCDO00767 359 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 AMHP03971 560 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 C4BPAP04003 597 aaKnown RBP6.98□□□□□ -1.29
ATXN3-223ENST00000553686 RB1P06400 928 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 GUCY1A2P33402 732 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 NDUFV1P49821 464 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 HYAL1Q12794 435 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 CPZQ66K79 652 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 NFRKBQ6P4R8 1299 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 UBALD2Q8IYN6 164 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 SPICE1Q8N0Z3 855 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 CAGE1Q8TC20 777 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 RPGRIP1Q96KN7 1286 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 MTG1Q9BT17 334 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-223ENST00000553686 VCPKMTQ9H867 229 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 BARX1Q9HBU1 254 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-223ENST00000553686 KCND1Q9NSA2 647 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 TMX2Q9Y320 296 aa6.98□□□□□ -1.29
ATXN3-223ENST00000553686 FASNP49327 2511 aaKnown RBP6.98□□□□□ -1.29
ATXN3-223ENST00000553686 COL4A6Q14031 1691 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 KPNA6O60684 536 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 KLHL18O94889 574 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 ASMTLO95671 621 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 CPT1AP50416 773 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 CLCN5P51795 746 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-223ENST00000553686 DMWDQ09019 674 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 NFATC3Q12968 1075 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 ADAM15Q13444 863 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 SKOR2Q2VWA4 1001 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-223ENST00000553686 TMEM177Q53S58 311 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 SNRNP48Q6IEG0 339 aaKnown RBP6.97□□□□□ -1.29
ATXN3-223ENST00000553686 TMEM179Q6ZVK1 233 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 KLHL36Q8N4N3 616 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 TMEM105Q8N8V8 129 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 RUBCNQ92622 972 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 MBD6Q96DN6 1003 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 MFSD1Q9H3U5 465 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 TMEM260Q9NX78 707 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 HDAC5Q9UQL6 1122 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 ASTN1O14525 1302 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 FRMPD3Q5JV73 1810 aa6.97□□□□□ -1.29
ATXN3-223ENST00000553686 CFAP47Q6ZTR5 3102 aa6.96□□□□□ -1.29
ATXN3-223ENST00000553686 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-223ENST00000553686 SLC12A8A0AV02 714 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 B4E1Z4 1266 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 B4GALT3O60512 393 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 ZBED4O75132 1171 aa6.96□□□□□ -1.3
ATXN3-223ENST00000553686 PDGFBP01127 241 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms