RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TSPY26PQ9H489 355 aa14.8□□□□□ -0.04
TUBB3-202ENST00000553656 CYP4F11Q9HBI6 524 aa14.8□□□□□ -0.04
TUBB3-202ENST00000553656 APOBEC3GQ9HC16 384 aaKnown RBP14.8□□□□□ -0.04
TUBB3-202ENST00000553656 TAB2Q9NYJ8 693 aa14.8□□□□□ -0.04
TUBB3-202ENST00000553656 THEGQ9P2T0 379 aa14.8□□□□□ -0.04
TUBB3-202ENST00000553656 AFF4Q9UHB7 1163 aaKnown RBP14.8□□□□□ -0.04
TUBB3-202ENST00000553656 FBXW11Q9UKB1 542 aa14.8□□□□□ -0.04
TUBB3-202ENST00000553656 CDH9Q9ULB4 789 aa14.8□□□□□ -0.04
TUBB3-202ENST00000553656 MAFFQ9ULX9 164 aa14.8□□□□□ -0.04
TUBB3-202ENST00000553656 GTPBP10A4D1E9 387 aaKnown RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 ABLIM3O94929 683 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 C8AP07357 584 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 PDGFRBP09619 1106 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 WEE2P0C1S8 567 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 ATF2P15336 505 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 TBXAS1P24557 533 aaPredicted RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 CDH8P55286 799 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 ADCY1Q08828 1119 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 LRMPQ12912 555 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 NCAPHQ15003 741 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 KRT31Q15323 416 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 MAPRE1Q15691 268 aaKnown RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 NFE2Q16621 373 aaPredicted RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 EXOC3L4Q17RC7 722 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 INTS6LQ5JSJ4 861 aaKnown RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 FKBP15Q5T1M5 1219 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 CES5AQ6NT32 575 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 LILRA6Q6PI73 481 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 RTL10Q7L3V2 364 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 DHX40Q8IX18 779 aaKnown RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 C2orf15Q8WU43 125 aaKnown RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 TNIP3Q96KP6 325 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 BCO2Q9BYV7 579 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 INTS2Q9H0H0 1204 aaKnown RBP14.79□□□□□ -0.04
TUBB3-202ENST00000553656 CD207Q9UJ71 328 aa14.79□□□□□ -0.04
TUBB3-202ENST00000553656 PLXNA3P51805 1871 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.78□□□□□ -0.04
TUBB3-202ENST00000553656 H3BQ06 376 aaPredicted RBP14.78□□□□□ -0.04
TUBB3-202ENST00000553656 LRRN2O75325 713 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 CD58P19256 250 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 PSMC1P62191 440 aaKnown RBP14.78□□□□□ -0.04
TUBB3-202ENST00000553656 DLX2Q07687 328 aaPredicted RBP14.78□□□□□ -0.04
TUBB3-202ENST00000553656 CUL2Q13617 745 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 CLUL1Q15846 466 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 RARS2Q5T160 578 aaKnown RBP14.78□□□□□ -0.04
TUBB3-202ENST00000553656 LRSAM1Q6UWE0 723 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 RNF19BQ6ZMZ0 732 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 UNC93AQ86WB7 457 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 PPM1KQ8N3J5 372 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 EHBP1Q8NDI1 1231 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 SLC7A14Q8TBB6 771 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 FAM200AQ8TCP9 573 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 CRACR2AQ9BSW2 395 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 SDCBP2Q9H190 292 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 VPS16Q9H269 839 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 FAM124BQ9H5Z6 455 aaPredicted RBP14.78□□□□□ -0.04
TUBB3-202ENST00000553656 CBX8Q9HC52 389 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 ZDHHC7Q9NXF8 308 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 ABI2Q9NYB9 513 aaPredicted RBP14.78□□□□□ -0.04
TUBB3-202ENST00000553656 CLEC1BQ9P126 229 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 FAM50BQ9Y247 325 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 PCDHB5Q9Y5E4 795 aa14.78□□□□□ -0.04
TUBB3-202ENST00000553656 MTMR11A4FU01 709 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 ZMYND10O75800 440 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 LRG1P02750 347 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 ZNF18P17022 549 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 LMO2P25791 158 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 LTBRP36941 435 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 NDST1P52848 882 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 COPB1P53618 953 aaKnown RBP14.77□□□□□ -0.05
TUBB3-202ENST00000553656 ITIH3Q06033 890 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 PLD1Q13393 1074 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 MGAT5BQ3V5L5 792 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 MIIPQ5JXC2 388 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 C4orf50Q6ZRC1 276 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 LUZP1Q86V48 1076 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 SPATA2LQ8IUW3 424 aaPredicted RBP14.77□□□□□ -0.05
TUBB3-202ENST00000553656 TCEAL8Q8IYN2 117 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 B3GALNT2Q8NCR0 500 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 SPPL2BQ8TCT7 592 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 TATDN2Q93075 761 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 FAM81BQ96LP2 452 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 APOL5Q9BWW9 433 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 PIDD1Q9HB75 910 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 PRDM6Q9NQX0 595 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 LIMA1Q9UHB6 759 aaKnown RBP14.77□□□□□ -0.05
TUBB3-202ENST00000553656 GTF3C4Q9UKN8 822 aa14.77□□□□□ -0.05
TUBB3-202ENST00000553656 ATP8B3O60423 1300 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 CCDC195A0A1B0GUA6 201 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 HCRTO43612 131 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 XYLBO75191 536 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 HNRNPA1P09651 372 aaKnown RBP eCLIP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 PTPN1P18031 435 aaKnown RBP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 HOXA9P31269 272 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 ALDH1A3P47895 512 aa14.76□□□□□ -0.05
TUBB3-202ENST00000553656 TUFMP49411 452 aaKnown RBP14.76□□□□□ -0.05
TUBB3-202ENST00000553656 CYP27A1Q02318 531 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms