RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 SREBF1P36956 1147 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 TAF6P49848 677 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 TAGAPQ8N103 731 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 SHCBP1Q8NEM2 672 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 OLFML3Q9NRN5 406 aa12.04□□□□□ -0.48
SYNE2-208ENST00000553289 METTL5Q9NRN9 209 aaKnown RBP12.04□□□□□ -0.48
SYNE2-208ENST00000553289 ARHGEF9O43307 516 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 SLC2A3P11169 496 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 PTGER2P43116 358 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 KBTBD12Q3ZCT8 623 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 SYTL3Q4VX76 610 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 BTNL9Q6UXG8 535 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 ACTRT1Q8TDG2 376 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 CELF4Q9BZC1 486 aaKnown RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 ZC3H13Q5T200 1668 aaKnown RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 OGTO15294 1046 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 ENO3P13929 434 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 PDK2Q15119 407 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 DGKDQ16760 1214 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 IL17RAQ96F46 866 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 SH2D3AQ9BRG2 576 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 IL25Q9H293 177 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 TAF6LQ9Y6J9 622 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 RALBP11234 206 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 GNL1P36915 607 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 NAMPTP43490 491 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 HSPA13P48723 471 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 ERVK-24P63145 666 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 GRIN1Q05586 938 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 MCL1Q07820 350 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 ITIH4Q14624 930 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 Q4G0T1 1027 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 TTI2Q6NXR4 508 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 SLC7A14Q8TBB6 771 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 ZNF526Q8TF50 670 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 TFB1MQ8WVM0 346 aaKnown RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 EME1Q96AY2 570 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 THAP2Q9H0W7 228 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 EHD4Q9H223 541 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 CFAP99D6REC4 459 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 PRPF4O43172 522 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 SLC37A4O43826 429 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 DEAF1O75398 565 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 PDGFRBP09619 1106 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 FAM200BP0CF97 657 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 NEK2P51955 445 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 GLB1LQ6UWU2 654 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 TMA16Q96EY4 203 aaKnown RBP12.03□□□□□ -0.48
SYNE2-208ENST00000553289 NAT9Q9BTE0 207 aa12.03□□□□□ -0.48
SYNE2-208ENST00000553289 B2RBV5 119 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 TBC1D4O60343 1298 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 CYP2C9P11712 490 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 ST8SIA6P61647 398 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 APBB2Q92870 758 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 FAR2Q96K12 515 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 TARS2Q9BW92 718 aaKnown RBP12.02□□□□□ -0.48
SYNE2-208ENST00000553289 SMARCAL1Q9NZC9 954 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 FAM32AQ9Y421 112 aaKnown RBP12.02□□□□□ -0.48
SYNE2-208ENST00000553289 AKAP10O43572 662 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 GLRA3O75311 464 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 ATP6V1E1P36543 226 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 RPS6P62753 249 aaKnown RBP12.02□□□□□ -0.48
SYNE2-208ENST00000553289 DCAF6Q58WW2 860 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 DNAJC9Q8WXX5 260 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 RIN2Q8WYP3 895 aaPredicted RBP12.02□□□□□ -0.48
SYNE2-208ENST00000553289 MYOZ2Q9NPC6 264 aa12.02□□□□□ -0.48
SYNE2-208ENST00000553289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.02□□□□□ -0.48
SYNE2-208ENST00000553289 C5orf58C9J3I9 102 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 CLASP2O75122 1294 aaKnown RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 SYF2O95926 243 aaKnown RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 APLFQ8IW19 511 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 THTPAQ9BU02 230 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 RUSC1Q9BVN2 902 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 FAM49BQ9NUQ9 324 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 CDV3Q9UKY7 258 aaKnown RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 FAM95CA0A1B0GW59 222 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 VDRP11473 427 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 RARGP13631 454 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 BRD2P25440 801 aaKnown RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 KCNJ1P48048 391 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 CACNB2Q08289 660 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 TAF1CQ15572 869 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 C6orf10Q5SRN2 563 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 RFX8Q6ZV50 586 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 DDX42Q86XP3 938 aaKnown RBP eCLIP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-208ENST00000553289 USP33Q8TEY7 942 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 CASKIN2Q8WXE0 1202 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 CCDC126Q96EE4 140 aa12.02□□□□□ -0.49
SYNE2-208ENST00000553289 GMCL1Q96IK5 515 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms