RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PSPC1Q8WXF1 523 aaKnown RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SLC7A3Q8WY07 619 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 RABGGTAQ92696 567 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 WNT2BQ93097 391 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 CNOT6LQ96LI5 555 aaKnown RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 YTHDC1Q96MU7 727 aaKnown RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 PNMA5Q96PV4 448 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 P2RY13Q9BPV8 354 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 ZDHHC5Q9C0B5 715 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 BRINP2Q9C0B6 783 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 FAM124BQ9H5Z6 455 aaPredicted RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 RIC8AQ9NPQ8 531 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 TMEM74BQ9NUR3 256 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SNTG2Q9NY99 539 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 PPME1Q9Y570 386 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 EVPLQ92817 2033 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 MTCL1Q9Y4B5 1905 aaKnown RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 COL4A3Q01955 1670 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ZMYM2Q9UBW7 1377 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 SMCO2A6NFE2 343 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 FAM86B1E9PN63 330 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CDK2AP1O14519 115 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 DDAH1O94760 285 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 B3GAT3O94766 335 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 EGFP01133 1207 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 PDGFAP04085 211 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 FAM86B2P0C5J1 330 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CALM1P0DP23 149 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CALM2P0DP24 149 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CALM3P0DP25 149 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CDK4P11802 303 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 GJA1P17302 382 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 AKAP5P24588 427 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 VARSP26640 1264 aaKnown RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CCR2P41597 374 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CCR10P46092 362 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ALDH1A3P47895 512 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 EPHB3P54753 998 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ARPP19P56211 112 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 POU5F1BQ06416 359 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 DHX9Q08211 1270 aaKnown RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 TFDP1Q14186 410 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 MXD4Q14582 209 aaPredicted RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 C2orf27AQ580R0 203 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF574Q6ZN55 896 aaPredicted RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 HS2ST1Q7LGA3 356 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 HEATR3Q7Z4Q2 680 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 RALYLQ86SE5 291 aaKnown RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ZNF589Q86UQ0 364 aaPredicted RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 RASSF3Q86WH2 238 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 NAXDQ8IW45 347 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CMTR1Q8N1G2 835 aaKnown RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 RHBDD1Q8TEB9 315 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 HASPINQ8TF76 798 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 FGF11Q92914 225 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ZFYVE19Q96K21 471 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 TBC1D32Q96NH3 1257 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 CAMK1GQ96NX5 476 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 RIT2Q99578 217 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 DSCC1Q9BVC3 393 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 EIF2AQ9BY44 585 aaKnown RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ANO3Q9BYT9 981 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ATXN3LQ9H3M9 355 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ZSWIM4Q9H7M6 989 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 KLK14Q9P0G3 267 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 SUSD2Q9UGT4 822 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 SERTAD1Q9UHV2 236 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 HES2Q9Y543 173 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 ASB3Q9Y575 518 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 INSL5Q9Y5Q6 135 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 HEMK1Q9Y5R4 338 aaPredicted RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 SMG1Q96Q15 3661 aaKnown RBP5.69□□□□□ -1.5
CKAP4-203ENST00000553039 PTPRQQ9UMZ3 2332 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 DOCK6Q96HP0 2047 aa5.69□□□□□ -1.5
CKAP4-203ENST00000553039 MYH7P12883 1935 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ABCA7Q8IZY2 2146 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 MYO9AB2RTY4 2548 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 A0A1B0GUA9 196 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 A0A1W2PQD8 194 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 CASTOR2A6NHX0 329 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 INO80B-WBP1J3KQ70 363 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 HIP1O00291 1037 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 EML1O00423 815 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 NRG2O14511 850 aaPredicted RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 EIF1AYO14602 144 aaKnown RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 GAS7O60861 476 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 MOSPD3O75425 235 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 STAU1O95793 577 aaKnown RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 JUPP14923 745 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 SDSP20132 328 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 BCKDHBP21953 392 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ITPKAP23677 461 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 HSD3B2P26439 372 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 MARCKSP29966 332 aaPredicted RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ADSSP30520 456 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 PTGER3P43115 390 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 MCM2P49736 904 aa5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ST13P50502 369 aaKnown RBP5.68□□□□□ -1.5
CKAP4-203ENST00000553039 ADCY7P51828 1080 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms