RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 UVSSAQ2YD98 709 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 SLC39A12Q504Y0 691 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 ATAT1Q5SQI0 421 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 CCDC149Q6ZUS6 474 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 TCEAL8Q8IYN2 117 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 TTC9BQ8N6N2 239 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 ATAD1Q8NBU5 361 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 SPATA18Q8TC71 538 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 ADAMTS19Q8TE59 1207 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 TAF4BQ92750 862 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 RIPOR3Q96MK2 946 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 PRKD2Q9BZL6 878 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 SDCBP2Q9H190 292 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 POMKQ9H5K3 350 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 APOBEC3GQ9HC16 384 aaKnown RBP15.12■□□□□ 0.01
PTCH1-226ENST00000553011 TMLHEQ9NVH6 421 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 DACH1Q9UI36 760 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 NME7Q9Y5B8 376 aa15.12■□□□□ 0.01
PTCH1-226ENST00000553011 TACC1O75410 805 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 PAPLNO95428 1278 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 FGFR1OPO95684 399 aaKnown RBP15.11■□□□□ 0.01
PTCH1-226ENST00000553011 GNA14O95837 355 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 PDGFRBP09619 1106 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 HNRNPA1P09651 372 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTCH1-226ENST00000553011 LMO2P25791 158 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 MTHFRP42898 656 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 CDH8P55286 799 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
PTCH1-226ENST00000553011 TSPY1Q01534 308 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 DUSP4Q13115 394 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 SASS6Q6UVJ0 657 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 IRF2BP1Q8IU81 584 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 TRIM59Q8IWR1 403 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 OR6B3Q8NGW1 331 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 CNOT6LQ96LI5 555 aaKnown RBP15.11■□□□□ 0.01
PTCH1-226ENST00000553011 ACBD6Q9BR61 282 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 PIDD1Q9HB75 910 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 INSL5Q9Y5Q6 135 aa15.11■□□□□ 0.01
PTCH1-226ENST00000553011 VCANP13611 3396 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 ATP2C2O75185 946 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 SP100P23497 879 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 PCSK1P29120 753 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 HOXA9P31269 272 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 GNL1P36915 607 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 FMO5P49326 533 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 MARSP56192 900 aaKnown RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 PSMC1P62191 440 aaKnown RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 TPD52L1Q16890 204 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 INTS6LQ5JSJ4 861 aaKnown RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 C11orf57Q6ZUT1 292 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 CREBRFQ8IUR6 639 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 DCP1BQ8IZD4 617 aaKnown RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 NECTIN4Q96NY8 510 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 PKMYT1Q99640 499 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 SYT15Q9BQS2 421 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 PHF7Q9BWX1 381 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-226ENST00000553011 RHOBTB2Q9BYZ6 727 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 IMPG2Q9BZV3 1241 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 SNX25Q9H3E2 840 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 RAB20Q9NX57 234 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 GTF3C4Q9UKN8 822 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 MAFFQ9ULX9 164 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 SLC27A5Q9Y2P5 690 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 YIPF1Q9Y548 306 aa15.1■□□□□ 0.01
PTCH1-226ENST00000553011 GREB1Q4ZG55 1949 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 MYBPHLA2RUH7 354 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 XYLBO75191 536 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 SOAT2O75908 522 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 LRG1P02750 347 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 FAM163BP0C2L3 166 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 CCDC192P0DO97 292 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 P4HA1P13674 534 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 ASPAP45381 313 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 NTHL1P78549 312 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 ZP2Q05996 745 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 TWF1Q12792 350 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 STX1AQ16623 288 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 CYP26C1Q6V0L0 522 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 RTL10Q7L3V2 364 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 ADHFE1Q8IWW8 467 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 RPGRIP1Q96KN7 1286 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 UHRF1Q96T88 793 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-226ENST00000553011 LPIN3Q9BQK8 851 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 DPEP3Q9H4B8 488 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 CRTAC1Q9NQ79 661 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 ANO10Q9NW15 660 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 HCFC1R1Q9NWW0 138 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 ABI2Q9NYB9 513 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-226ENST00000553011 CDH9Q9ULB4 789 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 COQ4Q9Y3A0 265 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTCH1-226ENST00000553011 DENND4CQ5VZ89 1909 aa15.09■□□□□ 0.01
PTCH1-226ENST00000553011 ZNF638Q14966 1978 aaKnown RBP15.09■□□□□ 0.01
PTCH1-226ENST00000553011 POU2F2P09086 479 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 TYRO3Q06418 890 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 KCNH2Q12809 1159 aa15.08■□□□□ 0
PTCH1-226ENST00000553011 NFE2Q16621 373 aaPredicted RBP15.08■□□□□ 0
PTCH1-226ENST00000553011 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms