RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 U2AF2P26368 475 aaKnown RBP eCLIP18.3■□□□□ 0.52
CACNB3-222ENST00000552465 GALK1P51570 392 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 AMPD2Q01433 879 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
CACNB3-222ENST00000552465 TRIM68Q6AZZ1 485 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 TCEAL6Q6IPX3 200 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 PSAPL1Q6NUJ1 521 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 DTHD1Q6ZMT9 781 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 TMEM150AQ86TG1 271 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 KCNN1Q92952 543 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 USP13Q92995 863 aaPredicted RBP18.3■□□□□ 0.52
CACNB3-222ENST00000552465 TCEAL3Q969E4 200 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 PNMA5Q96PV4 448 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 LIMCH1Q9UPQ0 1083 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 CCL26Q9Y258 94 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 SDK1Q7Z5N4 2213 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 OGTO15294 1046 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 F11P03951 625 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 HAPLN1P10915 354 aaPredicted RBP18.29■□□□□ 0.52
CACNB3-222ENST00000552465 AVPR1AP37288 418 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 LIG4P49917 911 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 NCKAP1LP55160 1127 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 HYIQ5T013 277 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 JADE1Q6IE81 842 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 LRRTM3Q86VH5 581 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 CD302Q8IX05 232 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 KCTD17Q8N5Z5 321 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 MAB21L3Q8N8X9 362 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 C2orf15Q8WU43 125 aaKnown RBP18.29■□□□□ 0.52
CACNB3-222ENST00000552465 FAM212AQ96EL1 285 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 HHIPQ96QV1 700 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 KCND2Q9NZV8 630 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 LARSQ9P2J5 1176 aaKnown RBP18.29■□□□□ 0.52
CACNB3-222ENST00000552465 DSEQ9UL01 958 aa18.29■□□□□ 0.52
CACNB3-222ENST00000552465 NUP210Q8TEM1 1887 aaPredicted RBP18.29■□□□□ 0.52
CACNB3-222ENST00000552465 NPHP3-ACAD11A0A0J9YXS1 232 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 ANO9A1A5B4 782 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 RHOBTB1O94844 696 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 ARSAP15289 507 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 DRD1P21728 446 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 DDX6P26196 483 aaKnown RBP eCLIP18.28■□□□□ 0.52
CACNB3-222ENST00000552465 NMT1P30419 496 aaKnown RBP18.28■□□□□ 0.52
CACNB3-222ENST00000552465 SLC12A3P55017 1021 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 NLRP12P59046 1061 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 SMARCB1Q12824 385 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 BFSP1Q12934 665 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 ELF2Q15723 593 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 THEM5Q8N1Q8 247 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 PLIN2Q99541 437 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 P2RY13Q9BPV8 354 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 TDP1Q9NUW8 608 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
CACNB3-222ENST00000552465 TBX20Q9UMR3 447 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 CHD6Q8TD26 2715 aa18.28■□□□□ 0.52
CACNB3-222ENST00000552465 A0A0B4J269 797 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 BCLAF3A2AJT9 711 aaKnown RBP18.27■□□□□ 0.52
CACNB3-222ENST00000552465 C4orf47A7E2U8 309 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 SOBPA7XYQ1 873 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 C1QTNF9BB2RNN3 333 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 HNRNPDLO14979 420 aaKnown RBP18.27■□□□□ 0.52
CACNB3-222ENST00000552465 DCLK1O15075 740 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 CAVIN2O95810 425 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 PIGRP01833 764 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 NFICP08651 508 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 C1QTNF9P0C862 333 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 PLA2G4BP0C869 781 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 HMGA1P17096 107 aaKnown RBP18.27■□□□□ 0.52
CACNB3-222ENST00000552465 NOVA1P51513 510 aaKnown RBP18.27■□□□□ 0.52
CACNB3-222ENST00000552465 HMGN5P82970 282 aaKnown RBP18.27■□□□□ 0.52
CACNB3-222ENST00000552465 CREB5Q02930 508 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 PDGFRLQ15198 375 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 FBXO43Q4G163 708 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 ARSHQ5FYA8 562 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 TXNDC8Q6A555 127 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 CC2D1AQ6P1N0 951 aaPredicted RBP18.27■□□□□ 0.52
CACNB3-222ENST00000552465 SYT13Q7L8C5 426 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 METTL23Q86XA0 190 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 FAM184AQ8NB25 1140 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 RIN3Q8TB24 985 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 SPPL2BQ8TCT7 592 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 EDEM2Q9BV94 578 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 KIF9Q9HAQ2 790 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.27■□□□□ 0.52
CACNB3-222ENST00000552465 EBF1Q9UH73 591 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 DERAQ9Y315 318 aa18.27■□□□□ 0.52
CACNB3-222ENST00000552465 CYB561D2O14569 222 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 GIPC1O14908 333 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 APBB3O95704 486 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 GJA4P35212 333 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 TMEM132DQ14C87 1099 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 NAIF1Q69YI7 327 aaPredicted RBP18.26■□□□□ 0.51
CACNB3-222ENST00000552465 UNQ6494/PRO21346Q6UXR6 183 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 MON1AQ86VX9 555 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 RPLP0P6Q8NHW5 317 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 PYM1Q9BRP8 204 aaKnown RBP18.26■□□□□ 0.51
CACNB3-222ENST00000552465 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 SH2B1Q9NRF2 756 aaPredicted RBP18.26■□□□□ 0.51
CACNB3-222ENST00000552465 ABI2Q9NYB9 513 aaPredicted RBP18.26■□□□□ 0.51
CACNB3-222ENST00000552465 ZMIZ1Q9ULJ6 1067 aa18.26■□□□□ 0.51
CACNB3-222ENST00000552465 CACNA1GO43497 2377 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms