RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PIP4P1Q86T03 277 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 PDZD3Q86UT5 571 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 HDDC3Q8N4P3 179 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 C2orf15Q8WU43 125 aaKnown RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 USP13Q92995 863 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 SEPT5Q99719 369 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 C17orf75Q9HAS0 396 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 KMT5AQ9NQR1 393 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 TUBGCP4Q9UGJ1 667 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 UBQLN1Q9UMX0 589 aaKnown RBP16.61■□□□□ 0.25
CACNB3-220ENST00000551716 INVSQ9Y283 1065 aa16.61■□□□□ 0.25
CACNB3-220ENST00000551716 MAP3K13O43283 966 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
CACNB3-220ENST00000551716 ALDH1A2O94788 518 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 LARGE1O95461 756 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 ODC1P11926 461 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 STRN3Q13033 797 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 SEMA3BQ13214 749 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
CACNB3-220ENST00000551716 MGAT5BQ3V5L5 792 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 RASSF3Q86WH2 238 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 SYT12Q8IV01 421 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 MAB21L3Q8N8X9 362 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 ECT2Q9H8V3 914 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 ARHGAP28Q9P2N2 729 aa16.6■□□□□ 0.25
CACNB3-220ENST00000551716 GCN1Q92616 2671 aaKnown RBP16.6■□□□□ 0.25
CACNB3-220ENST00000551716 NBEAQ8NFP9 2946 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 SPAARA0A1B0GVQ0 90 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 EIF4E1BA6NMX2 242 aaKnown RBP16.59■□□□□ 0.25
CACNB3-220ENST00000551716 ABLIM1O14639 778 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 CLDN3O15551 220 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 SOAT2O75908 522 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 SEC24BO95487 1268 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 CAPNS1P04632 268 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 CLTAP09496 248 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 HARSP12081 509 aaKnown RBP16.59■□□□□ 0.25
CACNB3-220ENST00000551716 ARSAP15289 507 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 HOXD12P35452 270 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 MAPK8P45983 427 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 ATXN3P54252 364 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-220ENST00000551716 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNB3-220ENST00000551716 ZBTB6Q15916 424 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 KYAT1Q16773 422 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 SLC23A3Q6PIS1 610 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 MON1AQ86VX9 555 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 MRPS31Q92665 395 aaKnown RBP16.59■□□□□ 0.25
CACNB3-220ENST00000551716 ATP2A3Q93084 1043 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 SPACA7Q96KW9 195 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 DRC1Q96MC2 740 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 LPIN3Q9BQK8 851 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 DSEQ9UL01 958 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 CCL26Q9Y258 94 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 STK24Q9Y6E0 443 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 WDFY3Q8IZQ1 3526 aa16.59■□□□□ 0.25
CACNB3-220ENST00000551716 TRIP11Q15643 1979 aa16.58■□□□□ 0.25
CACNB3-220ENST00000551716 BTBD18B2RXH4 712 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 PFKFB2O60825 505 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 ENGP17813 658 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 MCM7P33993 719 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 NLRP12P59046 1061 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 ORC2Q13416 577 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-220ENST00000551716 ANO7Q6IWH7 933 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 C19orf48Q6RUI8 117 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 ZPBP2Q6X784 338 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 TTC9BQ8N6N2 239 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 CEP76Q8TAP6 659 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 NTPCRQ9BSD7 190 aaKnown RBP16.58■□□□□ 0.24
CACNB3-220ENST00000551716 DUS2Q9NX74 493 aaKnown RBP16.58■□□□□ 0.24
CACNB3-220ENST00000551716 PCNX2A6NKB5 2137 aa16.58■□□□□ 0.24
CACNB3-220ENST00000551716 ITPR1Q14643 2758 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 NUP210Q8TEM1 1887 aaPredicted RBP16.57■□□□□ 0.24
CACNB3-220ENST00000551716 F11P03951 625 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 ATF6P18850 670 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 CCT6AP40227 531 aaKnown RBP16.57■□□□□ 0.24
CACNB3-220ENST00000551716 LILRA4P59901 499 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 TRIM29Q14134 588 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 SLC39A12Q504Y0 691 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 TAS1R3Q7RTX0 852 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 METTL23Q86XA0 190 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 DIS3L2Q8IYB7 885 aaKnown RBP16.57■□□□□ 0.24
CACNB3-220ENST00000551716 THEM5Q8N1Q8 247 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 CHCHD4Q8N4Q1 142 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 SPPL2BQ8TCT7 592 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 USP33Q8TEY7 942 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 OSCP1Q8WVF1 389 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 SENP8Q96LD8 212 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 TPSD1Q9BZJ3 242 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 ZCWPW1Q9H0M4 648 aa16.57■□□□□ 0.24
CACNB3-220ENST00000551716 TTC26A0AVF1 554 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 BCKDHBP21953 392 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 U2AF2P26368 475 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNB3-220ENST00000551716 IFNAR2P48551 515 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 SMTNP53814 917 aa16.56■□□□□ 0.24
CACNB3-220ENST00000551716 PPP2R3AQ06190 1150 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms