RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 HDDC3Q8N4P3 179 aa15.75■□□□□ 0.11
VPS29-209ENST00000551655 MAB21L3Q8N8X9 362 aa15.75■□□□□ 0.11
VPS29-209ENST00000551655 STKLD1Q8NE28 680 aa15.75■□□□□ 0.11
VPS29-209ENST00000551655 TTC16Q8NEE8 873 aa15.75■□□□□ 0.11
VPS29-209ENST00000551655 CNOT6LQ96LI5 555 aaKnown RBP15.75■□□□□ 0.11
VPS29-209ENST00000551655 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
VPS29-209ENST00000551655 ASB3Q9Y575 518 aa15.75■□□□□ 0.11
VPS29-209ENST00000551655 PTPRBP23467 1997 aa15.75■□□□□ 0.11
VPS29-209ENST00000551655 OAZ2O95190 189 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 SPATA31C1P0DKV0 1188 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 CD59P13987 128 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 ITPKAP23677 461 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 SPAG1Q07617 926 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 GALNT17Q6IS24 598 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 SLC23A3Q6PIS1 610 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 BLOC1S2Q6QNY1 142 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 CCNI2Q6ZMN8 369 aaPredicted RBP15.74■□□□□ 0.11
VPS29-209ENST00000551655 LPCAT2Q7L5N7 544 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 MARCH9Q86YJ5 346 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 SYT12Q8IV01 421 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 DEFB119Q8N690 84 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 GIPC2Q8TF65 315 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 CD101Q93033 1021 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 SEPT5Q99719 369 aaPredicted RBP15.74■□□□□ 0.11
VPS29-209ENST00000551655 AGXT2Q9BYV1 514 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 TTC12Q9H892 705 aaPredicted RBP15.74■□□□□ 0.11
VPS29-209ENST00000551655 CNTN3Q9P232 1028 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 PCDHA12Q9UN75 941 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 TNFSF13BQ9Y275 285 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 SHROOM3Q8TF72 1996 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 ANK1P16157 1881 aa15.74■□□□□ 0.11
VPS29-209ENST00000551655 TSC2P49815 1807 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 CEP192Q8TEP8 1941 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 M0QZQ0 153 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 WNT7AO00755 349 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 TNFRSF10BO14763 440 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 SH3BP5O60239 455 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 MED24O75448 989 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 FGF19O95750 216 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 FTH1P19P0C7X4 201 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 PLA2G2AP14555 144 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 RPS6KB1P23443 525 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 HSPA4P34932 840 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 TXKP42681 527 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 ATXN3P54252 364 aaPredicted RBP15.73■□□□□ 0.11
VPS29-209ENST00000551655 BFSP1Q12934 665 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 PADI6Q6TGC4 694 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 TMEM92Q6UXU6 159 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 TMEM150AQ86TG1 271 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 MINDY1Q8N5J2 469 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 OLIG1Q8TAK6 271 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 USP33Q8TEY7 942 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 ADAMTS14Q8WXS8 1223 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 ECT2Q9H8V3 914 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 PTPRHQ9HD43 1115 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 SCUBE2Q9NQ36 999 aa15.73■□□□□ 0.11
VPS29-209ENST00000551655 MAP3K13O43283 966 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 OPHN1O60890 802 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 CDC25CP30307 473 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 AVPR1AP37288 418 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 P2RY2P41231 377 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 GUCY2FP51841 1108 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 AMPD2Q01433 879 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 TRIP6Q15654 476 aaKnown RBP15.72■□□□□ 0.11
VPS29-209ENST00000551655 CALCRLQ16602 461 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 LARP1BQ659C4 914 aaKnown RBP15.72■□□□□ 0.11
VPS29-209ENST00000551655 TXNDC8Q6A555 127 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 CC2D1AQ6P1N0 951 aaPredicted RBP15.72■□□□□ 0.11
VPS29-209ENST00000551655 ITIH5Q86UX2 942 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 SFTPA1Q8IWL2 248 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 ACAP3Q96P50 834 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 GCNAQ96QF7 691 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 ACO2Q99798 780 aaKnown RBP15.72■□□□□ 0.11
VPS29-209ENST00000551655 TARS2Q9BW92 718 aaKnown RBP15.72■□□□□ 0.11
VPS29-209ENST00000551655 PILRBQ9UKJ0 227 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 SNX14Q9Y5W7 946 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 WNT6Q9Y6F9 365 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 ZNF462Q96JM2 2506 aa15.72■□□□□ 0.11
VPS29-209ENST00000551655 URB1O60287 2271 aaKnown RBP15.71■□□□□ 0.11
VPS29-209ENST00000551655 HELZP42694 1942 aaKnown RBP15.71■□□□□ 0.11
VPS29-209ENST00000551655 OR6C75A6NL08 312 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 K7EQS6 105 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 ABLIM1O14639 778 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.11
VPS29-209ENST00000551655 CYP11B2P19099 503 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 STK3Q13188 491 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 MGAT5BQ3V5L5 792 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 LYSMD4Q5XG99 296 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 CATSPER3Q86XQ3 398 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 CPA6Q8N4T0 437 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 OR10T2Q8NGX3 314 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
VPS29-209ENST00000551655 ZDHHC4Q9NPG8 344 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 TDP1Q9NUW8 608 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 SLC6A14Q9UN76 642 aa15.71■□□□□ 0.11
VPS29-209ENST00000551655 PLXND1Q9Y4D7 1925 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 K7ERI5 159 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 PPEF2O14830 753 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 EFNA5P52803 228 aa15.7■□□□□ 0.1
VPS29-209ENST00000551655 NR5A1Q13285 461 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms