RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 KIAA1257Q9ULG3 409 aa12.8□□□□□ -0.36
NR4A1-215ENST00000550557 EEF2KO00418 725 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 DNAJC6O75061 913 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 RTN2O75298 545 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 DUSP11O75319 330 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF189O75820 626 aaPredicted RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 CKBP12277 381 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 PPM1AP35813 382 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 ATXN3P54252 364 aaPredicted RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 SNCBQ16143 134 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 THEMIS2Q5TEJ8 643 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 ARHGEF2Q92974 986 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 PNKPQ96T60 521 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 CBWD1Q9BRT8 395 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 NFASCO94856 1347 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 SSU72P8A0A1W2PR75 194 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 SEPT4O43236 478 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 TUFMP49411 452 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF131P52739 623 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 CUL1Q13616 776 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 EXT2Q93063 718 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 CYFIP2Q96F07 1278 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 NDFIP2Q9NV92 336 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 DDX43Q9NXZ2 648 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 PALB2Q86YC2 1186 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 CDC26Q8NHZ8 85 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 PGLYRP2Q96PD5 576 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 SYT15Q9BQS2 421 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 SNCAIPQ9Y6H5 919 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 F5H5T6 163 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 NCK2O43639 380 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 ASGR1P07306 291 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 UCHL3P15374 230 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 BRD2P25440 801 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 E2F4Q16254 413 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 ICE2Q659A1 982 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 NOA1Q8NC60 698 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 SCG3Q8WXD2 468 aaKnown RBP12.79□□□□□ -0.36
NR4A1-215ENST00000550557 CGRRF1Q99675 332 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 PLA2G4CQ9UP65 541 aa12.79□□□□□ -0.36
NR4A1-215ENST00000550557 DR1Q01658 176 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 ROR1Q01973 937 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 EFEMP1Q12805 493 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 CUL2Q13617 745 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 GIT2Q14161 759 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 SLMAPQ14BN4 828 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 KCNA10Q16322 511 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 TAF1BQ53T94 588 aaPredicted RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 BEND6Q5SZJ8 279 aaPredicted RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 KDELC2Q7Z4H8 507 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 PDGFCQ9NRA1 345 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 PLAAQ9Y263 795 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 DIS3Q9Y2L1 958 aaKnown RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 UBA6A0AVT1 1052 aaPredicted RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 CASQ2O14958 399 aaPredicted RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 ZNF185O15231 689 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 CD52P31358 61 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 CCDC149Q6ZUS6 474 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 OTOP2Q7RTS6 562 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 ZC3H18Q86VM9 953 aaKnown RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 DNAJC7Q99615 494 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 PHRF1Q9P1Y6 1649 aaKnown RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 SLC12A8A0AV02 714 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 FAM47DPA6NHR8 397 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 BMP6P22004 513 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 AKT1P31749 480 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 FUT2Q10981 343 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 SLC12A1Q13621 1099 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 MDH1BQ5I0G3 518 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 TRAPPC11Q7Z392 1133 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 MSL3Q8N5Y2 521 aaKnown RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 BRI3BPQ8WY22 251 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 SNX19Q92543 992 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 TRIM54Q9BYV2 358 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 ASB7Q9H672 318 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 KRT82Q9NSB4 513 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 HACD3Q9P035 362 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 CYTH3O43739 400 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 DHX9Q08211 1270 aaKnown RBP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 NSUN2Q08J23 767 aaKnown RBP eCLIP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 DLK2Q6UY11 383 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 WDR49Q8IV35 697 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 SPATA4Q8NEY3 305 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 RFFLQ8WZ73 363 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 MCEEQ96PE7 176 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.78□□□□□ -0.36
NR4A1-215ENST00000550557 NID2Q14112 1375 aa12.78□□□□□ -0.36
NR4A1-215ENST00000550557 UMODL1Q5DID0 1318 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 TMEM150BA6NC51 233 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 CYP3A4P08684 503 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 ACADMP11310 421 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 VDRP11473 427 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 SCNN1GP51170 649 aa12.77□□□□□ -0.36
NR4A1-215ENST00000550557 ARL4CP56559 192 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms