RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 MYBPHLA2RUH7 354 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 VPS37CA5D8V6 355 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-210ENST00000550513 PRR5-ARHGAP8B1AHC4 643 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 CYB561D2O14569 222 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 CDR1P51861 262 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 ARHGAP8P85298 464 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 GAS6Q14393 721 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 TXNDC11Q6PKC3 985 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 DYMQ7RTS9 669 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-210ENST00000550513 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 SPEM1Q8N4L4 309 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 CELF5Q8N6W0 485 aaKnown RBP11.72□□□□□ -0.53
PFDN5-210ENST00000550513 TTC8Q8TAM2 541 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 TASP1Q9H6P5 420 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 ABI2Q9NYB9 513 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-210ENST00000550513 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 STYXL1Q9Y6J8 313 aa11.72□□□□□ -0.53
PFDN5-210ENST00000550513 PPP1R37O75864 691 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 IL18RAPO95256 599 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 PAPSS2O95340 614 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-210ENST00000550513 WEE1P30291 646 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 TXLNAP40222 546 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 POU5F1Q01860 360 aaKnown RBP11.71□□□□□ -0.53
PFDN5-210ENST00000550513 SPEM2Q0P670 501 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 SMARCB1Q12824 385 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 SIM2Q14190 667 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-210ENST00000550513 PON2Q15165 354 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 WDR44Q5JSH3 913 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 WSCD1Q658N2 575 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 NT5DC4Q86YG4 428 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 LRRC3BQ96PB8 259 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 IKZF4Q9H2S9 585 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 MRPL44Q9H9J2 332 aaKnown RBP11.71□□□□□ -0.53
PFDN5-210ENST00000550513 IL21Q9HBE4 155 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 PARD6AQ9NPB6 346 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 SEL1LQ9UBV2 794 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 ZMYM5Q9UJ78 669 aa11.71□□□□□ -0.53
PFDN5-210ENST00000550513 KPNA7A9QM74 516 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 CHURC1-FNTBB4DL54 471 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 K7ESF4 209 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 HAPLN1P10915 354 aaPredicted RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 DDIT3P35638 169 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 AVPR1AP37288 418 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 PNPLA4P41247 253 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 FNTBP49356 437 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 TSPY1Q01534 308 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 TNK2Q07912 1038 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 DMWDQ09019 674 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 CCINQ13939 588 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 POSTNQ15063 836 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 ITPRIPL2Q3MIP1 535 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 CRELD2Q6UXH1 353 aaPredicted RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 ZNF720Q7Z2F6 126 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 LONP2Q86WA8 852 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 DCP1BQ8IZD4 617 aaKnown RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 RTKNQ9BST9 563 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 SMG9Q9H0W8 520 aaKnown RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 KIF9Q9HAQ2 790 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 THG1LQ9NWX6 298 aaKnown RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 EXOC7Q9UPT5 735 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 PCDHB5Q9Y5E4 795 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 CEP192Q8TEP8 1941 aa11.7□□□□□ -0.54
PFDN5-210ENST00000550513 TNRC6BQ9UPQ9 1833 aaKnown RBP11.7□□□□□ -0.54
PFDN5-210ENST00000550513 LRP3O75074 770 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 GCNT3O95395 438 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 ITGB3P05106 788 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 RETP07949 1114 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 GAP43P17677 238 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 TGM1P22735 817 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 DDX6P26196 483 aaKnown RBP eCLIP11.69□□□□□ -0.542e-28■□□□□ 11.3
PFDN5-210ENST00000550513 ADSSP30520 456 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 POLR2BP30876 1174 aaKnown RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 CNR2P34972 360 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 NLRP12P59046 1061 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 TFAMQ00059 246 aaKnown RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 BFSP1Q12934 665 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 SRSF5Q13243 272 aaKnown RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 PTPAQ15257 358 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 L1TD1Q5T7N2 865 aaKnown RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 LRRTM3Q86VH5 581 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 BRSK2Q8IWQ3 736 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 CMTM8Q8IZV2 173 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 SYNPOQ8N3V7 929 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 MAB21L3Q8N8X9 362 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 STKLD1Q8NE28 680 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 LEO1Q8WVC0 666 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-210ENST00000550513 SAAL1Q96ER3 474 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 FAM213AQ9BRX8 229 aa11.69□□□□□ -0.54
PFDN5-210ENST00000550513 SLC46A2Q9BY10 475 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms